Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 2.4e-57 225.3 119 100.0
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 4.3e-46 188.0 119 80.7
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 9.9e-43 176.8 119 77.3
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.1e-40 169.1 119 73.9
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 8.4e-34 147.1 119 61.3
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 9.3e-33 143.7 120 64.2
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.2e-32 143.3 119 63.0
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 7.4e-30 134.0 118 60.2
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 9.6e-30 133.7 119 57.1
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 1.6e-29 132.9 119 57.1
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.1e-28 130.2 100 64.0
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.8e-28 129.4 100 64.0
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.8e-28 129.4 111 59.5
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 2.4e-28 129.0 120 55.0
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 4.1e-28 128.3 121 56.2
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 4.1e-28 128.3 119 57.1
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 6.9e-28 127.5 121 51.2
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 6.9e-28 127.5 120 57.5
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 6.9e-28 127.5 121 58.7
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 6.9e-28 127.5 119 56.3
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 1.2e-27 126.7 119 56.3
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.6e-27 125.6 101 63.4
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 3.4e-27 125.2 119 51.3
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 4.5e-27 124.8 121 55.4
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 2.2e-26 122.5 121 54.5
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 3.8e-26 121.7 119 57.1
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 5.0e-26 121.3 120 59.2
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 1.1e-25 120.2 120 53.3
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 1.4e-25 119.8 116 54.3
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.4e-25 119.8 96 63.5
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.4e-25 119.8 118 50.0
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 1.9e-25 119.4 119 51.3
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 1.9e-25 119.4 95 57.9
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 3.2e-25 118.6 111 55.9
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 3.2e-25 118.6 111 55.9
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 3.2e-25 118.6 88 65.9
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 3.2e-25 118.6 120 54.2
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.2e-25 118.6 120 50.8
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 5.5e-25 117.9 119 52.1
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 7.2e-25 117.5 120 56.7
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 7.2e-25 117.5 119 52.1
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 9.3e-25 117.1 96 61.5
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.2e-24 116.7 120 50.0
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.6e-24 116.3 120 55.0
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.6e-24 116.3 120 50.0
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 1.6e-24 116.3 98 56.1
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 3.5e-24 115.2 116 54.3
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 7.9e-24 114.0 121 51.2
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.3e-23 113.2 106 51.9
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.8e-23 112.8 120 54.2
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 2.3e-23 112.5 99 52.5
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 3.9e-23 111.7 121 48.8
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 5.1e-23 111.3 113 51.3
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 5.1e-23 111.3 100 57.0
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 1.5e-22 109.8 122 51.6
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 3.3e-22 108.6 113 53.1
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 4.3e-22 108.2 119 50.4
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 5.7e-22 107.8 119 49.6
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 5.7e-22 107.8 113 53.1
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 1.3e-21 106.7 121 49.6
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 2.2e-21 105.9 120 43.3
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.2e-21 105.9 119 51.3
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 4.8e-21 104.8 119 49.6
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 8.2e-21 104.0 86 61.6
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 8.2e-21 104.0 119 51.3
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 8.2e-21 104.0 119 51.3
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.8e-20 102.8 102 55.9
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 3.1e-20 102.1 103 53.4
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 6.9e-20 100.9 119 49.6
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 9.0e-20 100.5 121 49.6
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 1.2e-19 100.1 119 43.7
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 1.5e-19 99.8 119 50.4
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 1.5e-19 99.8 119 50.4
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 2.0e-19 99.4 119 48.7
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 2.6e-19 99.0 111 49.5
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 3.4e-19 98.6 119 50.4
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 5.9e-19 97.8 100 50.0
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.0e-18 97.1 119 47.9
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 1.3e-18 96.7 117 47.9
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 1.3e-18 96.7 117 47.9
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.7e-18 96.3 120 40.8
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.2e-18 95.9 120 48.3
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 6.5e-18 94.4 102 50.0
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 8.5e-18 94.0 117 47.0
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.9e-17 92.8 89 49.4
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 1.9e-17 92.8 113 46.0
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 2.5e-17 92.4 101 50.5
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.6e-16 89.7 111 45.0
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 3.0e-15 85.5 79 51.9
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 5.1e-15 84.7 76 56.6
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.1e-15 84.7 96 46.9
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 8.8e-15 84.0 105 42.9
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 8.8e-15 84.0 79 50.6
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 1.1e-14 83.6 117 42.7
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.1e-14 83.6 79 50.6
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 2.4e-12 75.9 107 45.8
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 3.1e-12 75.5 115 39.1
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 4.1e-12 75.1 74 50.0
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 1.7e-10 69.7 75 49.3
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 1.7e-10 69.7 75 49.3
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.0e-10 68.2 59 59.3
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.4e-09 66.6 95 37.9
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 3.2e-09 65.5 86 44.2
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 5.5e-09 64.7 63 55.6
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 9.4e-09 63.9 111 33.3
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 2.1e-08 62.8 66 48.5
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 1.5e-06 56.6 37 59.5
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 3.3e-06 55.5 76 38.2


User provided reference genes

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