Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 2.5e-57 225.3 120 100.0
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.1e-41 173.3 120 81.7
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 1.9e-41 172.6 120 79.2
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 3.2e-41 171.8 118 80.5
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 8.8e-31 137.1 123 66.7
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.3e-30 135.2 122 67.2
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 5.7e-30 134.4 125 64.8
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 2.8e-29 132.1 120 61.7
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.8e-28 129.4 122 63.1
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.8e-28 129.4 119 63.0
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.1e-28 128.6 120 59.2
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.1e-28 128.6 120 59.2
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 3.1e-28 128.6 132 62.9
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 5.3e-28 127.9 131 65.6
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 9.1e-28 127.1 120 60.0
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 9.1e-28 127.1 120 65.0
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 9.1e-28 127.1 126 62.7
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 1.6e-27 126.3 122 59.0
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 2.0e-27 125.9 121 63.6
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 4.5e-27 124.8 123 63.4
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 5.9e-27 124.4 121 62.8
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 7.7e-27 124.0 120 62.5
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.0e-26 123.6 125 62.4
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 1.0e-26 123.6 124 62.9
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.3e-26 123.2 129 61.2
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 2.2e-26 122.5 120 56.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 2.9e-26 122.1 118 60.2
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 5.0e-26 121.3 130 63.1
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 6.5e-26 120.9 120 64.2
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 8.5e-26 120.6 132 55.3
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 8.5e-26 120.6 141 51.1
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.1e-25 120.2 122 59.8
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 3.2e-25 118.6 123 63.4
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 4.2e-25 118.2 120 62.5
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.5e-25 117.9 134 59.0
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 7.2e-25 117.5 126 60.3
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 7.2e-25 117.5 123 61.0
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 7.2e-25 117.5 122 61.5
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 7.2e-25 117.5 122 59.8
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 9.4e-25 117.1 122 55.7
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 1.2e-24 116.7 127 55.9
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.6e-24 116.3 123 63.4
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 1.6e-24 116.3 138 54.3
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.6e-24 116.3 128 59.4
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 2.1e-24 115.9 120 55.0
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.7e-24 114.8 120 60.8
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.7e-24 114.8 136 58.8
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 4.7e-24 114.8 135 57.8
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 4.7e-24 114.8 124 63.7
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 8.0e-24 114.0 129 57.4
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.0e-23 113.6 122 57.4
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 1.0e-23 113.6 119 54.6
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 1.4e-23 113.2 129 55.0
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.3e-23 112.5 137 56.9
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.0e-23 112.1 125 54.4
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 3.0e-23 112.1 128 53.9
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 3.0e-23 112.1 122 59.8
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 5.2e-23 111.3 125 55.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 5.2e-23 111.3 134 53.7
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 5.2e-23 111.3 126 60.3
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 5.2e-23 111.3 127 56.7
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.2e-22 110.2 127 59.8
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 3.3e-22 108.6 125 56.0
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 3.3e-22 108.6 121 56.2
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 9.7e-22 107.1 126 57.1
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 9.7e-22 107.1 126 57.1
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 9.7e-22 107.1 129 58.1
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 9.7e-22 107.1 135 54.1
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.7e-21 105.1 120 56.7
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 4.8e-21 104.8 124 57.3
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 4.8e-21 104.8 133 51.1
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 1.8e-20 102.8 117 49.6
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 3.1e-20 102.1 125 56.0
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 4.1e-20 101.7 133 52.6
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 5.3e-20 101.3 120 55.0
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 5.3e-20 101.3 120 55.0
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 5.3e-20 101.3 124 56.5
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.6e-19 99.8 122 54.9
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 2.0e-19 99.4 124 51.6
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 2.0e-19 99.4 124 54.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.0e-19 99.4 129 51.9
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 4.5e-19 98.2 139 47.5
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.0e-18 97.1 111 57.7
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.7e-18 96.3 129 51.9
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.2e-18 95.9 128 51.6
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.1e-16 89.4 62 71.0
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.7e-16 89.0 62 71.0
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.2e-14 83.6 103 49.5
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 4.4e-14 81.6 68 63.2
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 4.4e-14 81.6 121 45.5
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 3.7e-13 78.6 139 40.3
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.8e-12 76.3 123 48.8
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 5.4e-12 74.7 59 64.4
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 7.7e-11 70.9 74 51.4
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 7.7e-11 70.9 45 73.3
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.3e-10 69.3 48 68.8
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.8e-10 68.6 57 59.6


User provided reference genes

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