Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023616 Sechium edule HOM05D007257 ORTHO05D008924 1.7e-60 235.7 115 100.0
ClCG06G009780 Citrullus lanatus HOM05D007257 ORTHO05D008924 5.1e-28 127.9 116 61.2
MELO3C008506.2 Cucumis melo HOM05D007257 ORTHO05D008924 2.5e-22 109.0 118 54.2
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 9.3e-22 107.1 118 54.2
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 3.9e-12 75.1 114 43.0
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 3.3e-11 72.0 113 43.4
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 7.4e-11 70.9 122 40.2
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 3.1e-09 65.5 123 40.7
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 3.1e-09 65.5 125 40.0
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 4.1e-09 65.1 122 40.2
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 4.1e-09 65.1 122 40.2
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 3.4e-08 62.0 111 37.8
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 4.5e-08 61.6 119 38.7
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 7.7e-08 60.8 119 41.2
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 7.7e-08 60.8 114 36.0
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 7.7e-08 60.8 114 36.0
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 7.7e-08 60.8 112 38.4
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 1.3e-07 60.1 117 39.3
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 1.3e-07 60.1 110 38.2
Prupe.7G270300 Prunus persica HOM05D007257 ORTHO05D008924 1.3e-07 60.1 149 34.2
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 1.7e-07 59.7 117 40.2
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.7e-07 59.7 121 37.2
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 2.2e-07 59.3 129 34.9
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 2.9e-07 58.9 130 36.2
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 3.8e-07 58.5 121 37.2
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 6.5e-07 57.8 113 36.3
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 6.5e-07 57.8 128 35.9
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 8.5e-07 57.4 123 38.2
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 1.1e-06 57.0 125 34.4
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 1.1e-06 57.0 110 38.2
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 1.4e-06 56.6 120 34.2
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 1.4e-06 56.6 117 36.8
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 1.9e-06 56.2 113 36.3
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 4.2e-06 55.1 122 35.2
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 5.5e-06 54.7 114 35.1


User provided reference genes

Program Settings