Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 6.4e-180 634.0 334 100.0
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 4.7e-58 229.2 363 49.0
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 2.6e-56 223.4 359 49.0
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.5e-51 207.6 242 57.9
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 2.1e-26 124.0 367 32.7
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 2.8e-26 123.6 358 34.6
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.8e-25 120.9 337 34.7
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 3.1e-25 120.2 357 33.6
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.0e-25 119.8 328 33.2
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 5.3e-25 119.4 310 35.5
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.0e-24 117.5 354 33.6
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 2.0e-24 117.5 357 35.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 2.6e-24 117.1 354 33.3
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 4.5e-24 116.3 370 34.1
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.0e-23 115.2 370 34.1
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.0e-23 115.2 261 37.5
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.3e-23 114.8 370 34.1
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.7e-23 114.4 218 39.9
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.7e-23 114.4 363 31.1
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 6.5e-23 112.5 364 31.9
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 6.5e-23 112.5 366 33.3
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 7.1e-22 109.0 363 33.3
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 2.7e-21 107.1 319 33.2
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.8e-20 104.4 397 31.0
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 3.0e-20 103.6 369 32.5
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 5.1e-20 102.8 407 31.7
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 8.7e-20 102.1 364 31.9
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.5e-19 101.3 253 36.0
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 5.7e-19 99.4 211 36.5
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.3e-18 98.2 234 39.3
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 1.3e-18 98.2 419 28.2
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 4.8e-18 96.3 432 27.5
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.4e-17 94.7 302 32.8
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 7.6e-16 89.0 426 27.7
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 1.0e-15 88.6 290 31.7
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.3e-15 88.2 326 31.3
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.7e-15 87.8 362 29.0
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 8.5e-15 85.5 317 32.2
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 3.2e-14 83.6 266 30.5
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 4.2e-14 83.2 409 28.4
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.2e-14 82.4 356 27.8
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 9.3e-14 82.0 394 29.2
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 2.1e-13 80.9 318 28.0
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.7e-13 80.5 125 48.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 3.6e-13 80.1 232 35.8
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 6.1e-13 79.3 299 30.8
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 1.0e-12 78.6 384 30.7
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 3.0e-12 77.0 229 33.2
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 3.9e-12 76.6 336 29.8
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 8.7e-12 75.5 378 27.0
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.5e-11 73.9 302 30.1
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.5e-11 73.9 404 26.7
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 4.8e-10 69.7 287 28.2
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.4e-09 68.2 236 32.2
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.8e-09 67.8 80 51.2
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.4e-09 67.4 70 58.6
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 4.1e-09 66.6 66 60.6
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.2e-08 65.1 287 27.2
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 5.9e-08 62.8 338 27.2
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 1.3e-07 61.6 346 24.9
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.7e-07 61.2 312 27.6
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.1e-06 58.5 412 26.0
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 3.2e-06 57.0 305 26.6
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 5.5e-06 56.2 194 30.4
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 7.2e-06 55.8 309 24.9
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 7.2e-06 55.8 93 41.9


User provided reference genes

Program Settings