Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 9.3e-150 533.5 265 100.0
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 5.9e-112 407.9 276 75.7
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.8e-111 405.2 273 76.6
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 3.0e-71 272.7 202 74.8
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.4e-60 237.3 267 49.8
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.8e-60 236.9 203 58.6
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.8e-60 235.0 203 58.6
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 6.8e-60 235.0 280 47.5
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.8e-60 235.0 233 53.2
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.5e-59 233.8 203 58.6
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.5e-59 233.8 192 57.8
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.0e-59 233.4 266 50.4
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.0e-59 233.4 203 58.1
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-59 233.4 214 55.1
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.0e-59 233.4 203 58.1
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.6e-59 233.0 203 58.1
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.4e-59 232.6 203 58.1
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 4.4e-59 232.3 191 59.2
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 5.8e-59 231.9 191 60.7
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 7.6e-59 231.5 188 59.6
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 7.6e-59 231.5 280 46.4
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 9.9e-59 231.1 192 58.3
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.3e-58 230.7 223 53.4
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.7e-58 230.3 188 60.6
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 2.2e-58 229.9 274 46.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 2.2e-58 229.9 223 53.4
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 2.9e-58 229.6 192 58.3
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.8e-58 229.2 215 54.9
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.8e-58 229.2 229 52.8
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 6.4e-58 228.4 189 58.2
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 8.4e-58 228.0 221 50.7
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.1e-57 227.6 188 60.6
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.4e-57 227.3 205 55.1
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 1.4e-57 227.3 199 56.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.4e-57 227.3 211 53.6
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 1.9e-57 226.9 192 56.8
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 2.4e-57 226.5 190 58.9
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.4e-57 226.5 275 46.5
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.2e-57 226.1 224 54.9
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 4.2e-57 225.7 213 55.4
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 4.2e-57 225.7 190 58.9
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 5.4e-57 225.3 191 58.6
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 5.4e-57 225.3 196 56.1
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 9.2e-57 224.6 192 55.7
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 2.1e-56 223.4 213 54.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 2.7e-56 223.0 212 54.7
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.5e-56 222.6 192 56.8
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 4.6e-56 222.2 194 57.2
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 4.6e-56 222.2 191 53.9
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 6.0e-56 221.9 213 54.5
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 6.0e-56 221.9 220 54.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 6.0e-56 221.9 184 60.9
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 7.8e-56 221.5 213 53.1
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 7.8e-56 221.5 247 49.4
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.0e-55 221.1 213 53.1
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.0e-55 221.1 192 56.2
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 1.0e-55 221.1 193 60.1
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.3e-55 220.7 213 53.5
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.3e-55 220.7 213 53.5
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.3e-55 220.7 212 54.7
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.3e-55 220.7 264 47.7
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.3e-55 219.9 213 55.4
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 3.0e-55 219.5 243 51.0
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 5.1e-55 218.8 213 53.5
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 5.1e-55 218.8 193 59.6
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 5.1e-55 218.8 200 57.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.6e-55 218.4 266 46.2
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 8.7e-55 218.0 192 58.9
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 8.7e-55 218.0 218 54.1
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.1e-54 217.6 192 56.2
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.1e-54 217.6 195 57.9
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.1e-54 217.6 191 54.5
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 3.3e-54 216.1 224 51.8
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 7.3e-54 214.9 214 51.9
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 9.6e-54 214.5 228 51.3
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 2.1e-53 213.4 200 54.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.1e-53 213.4 290 44.8
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.6e-53 212.6 214 52.8
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 8.1e-53 211.5 227 51.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.1e-52 211.1 210 52.4
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.4e-52 209.9 193 54.9
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 4.0e-52 209.1 207 53.6
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.2e-51 207.6 192 54.2
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.4e-51 205.7 188 57.4
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.9e-50 203.0 252 46.8
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 2.9e-50 203.0 189 53.4
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 3.2e-49 199.5 212 51.4
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 5.4e-49 198.7 195 50.8
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 2.1e-48 196.8 213 51.2
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 3.5e-48 196.1 211 50.7
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.5e-48 196.1 203 50.2
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.5e-48 196.1 192 53.1
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.1e-47 192.2 218 47.7
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 6.6e-47 191.8 283 43.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.9e-46 190.3 192 50.0
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 9.6e-46 188.0 202 50.0
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.6e-45 187.2 221 44.3
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.8e-45 186.4 159 60.4
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 3.4e-43 179.5 192 48.4
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 5.8e-43 178.7 144 61.1
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.2e-40 171.0 150 58.0
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.2e-35 154.5 199 44.2
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.1e-32 143.7 178 45.5
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 3.3e-30 136.3 126 54.0
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 5.7e-30 135.6 117 59.0
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 3.1e-28 129.8 128 53.9
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.2e-27 127.9 117 53.8
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 2.6e-27 126.7 204 44.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.3e-26 124.4 220 34.1
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.5e-25 120.2 136 47.8
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 3.2e-25 119.8 139 48.2
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.3e-23 113.6 120 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 4.3e-22 109.4 146 45.9
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.2e-19 101.3 138 42.8
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.9e-19 99.0 214 32.2
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.2e-18 97.1 110 48.2
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 1.9e-17 94.0 74 56.8
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-17 92.8 116 39.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.2e-17 92.0 130 45.4
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 2.7e-16 90.1 64 60.9
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-12 77.0 96 46.9
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.0e-07 61.6 46 60.9
Mapoly0019s0038 Marchantia polymorpha HOM05D005733 ORTHO05D007442 9.7e-06 55.1 120 29.2


User provided reference genes

Program Settings