Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023495 Sechium edule HOM05D000002 ORTHO05D000001 4.6e-70 267.7 128 100.0
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 2.8e-19 99.0 123 41.5
Sabra16G0137600 Salix brachista HOM05D000136 ORTHO05D000080 1.5e-15 86.7 117 40.2
Sed0015052 Sechium edule HOM05D000002 ORTHO05D000001 1.5e-15 86.7 101 43.6
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-15 85.5 118 42.4
Sabra07G0042600 Salix brachista HOM05D000002 ORTHO05D000001 4.2e-15 85.1 123 36.6
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 9.4e-15 84.0 122 37.7
TAR218G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-14 83.6 99 44.4
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 2.7e-14 82.4 112 41.1
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.7e-14 81.6 105 44.8
Sabra11G0117700 Salix brachista HOM05D020515 ORTHO05D000001 1.0e-13 80.5 107 40.2
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-13 79.7 111 36.0
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 5.2e-13 78.2 112 38.4
RcHm_v2.0_Chr6g0304931 Rosa chinensis HOM05D000002 ORTHO05D000001 6.8e-13 77.8 115 35.7
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 8.8e-13 77.4 111 35.1
Potri.008G044250 Populus trichocarpa HOM05D000002 ORTHO05D000001 1.2e-12 77.0 113 38.1
Sed0006434 Sechium edule HOM05D000002 ORTHO05D000001 3.4e-12 75.5 84 44.0
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 4.4e-12 75.1 115 36.5
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 4.4e-12 75.1 101 38.6
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 4.4e-12 75.1 115 36.5
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-12 73.9 112 35.7
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-12 73.9 106 39.6
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-11 73.2 107 37.4
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 2.8e-11 72.4 118 37.3
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 3.7e-11 72.0 118 35.6
CiPaw.01G057300 Carya illinoinensis HOM05D000002 ORTHO05D000001 4.8e-11 71.6 122 36.1
MD09G1214100 Malus domestica HOM05D000002 ORTHO05D000001 4.8e-11 71.6 110 37.3
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 4.8e-11 71.6 136 32.4
MD12G1052500 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-10 70.5 114 36.8
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-10 70.5 114 36.0
MD05G1050400 Malus domestica HOM05D000002 ORTHO05D000001 1.4e-10 70.1 115 35.7
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-10 69.3 102 37.3
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-10 69.3 104 39.4
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-10 68.9 107 36.4
QL02p033098 Quercus lobata HOM05D013570 ORTHO05D000001 3.1e-10 68.9 94 44.7
RcHm_v2.0_Chr1g0326341 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-10 68.6 132 34.8
Hma1.2p1_0098F.1_g048290 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 5.4e-10 68.2 103 38.8
CiPaw.14G093700 Carya illinoinensis HOM05D000002 ORTHO05D000001 7.0e-10 67.8 99 40.4
COL.COLO4_27419 Corchorus olitorius HOM05D042331 ORTHO05D010776 7.0e-10 67.8 106 34.9
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 7.0e-10 67.8 103 36.9
MD04G1231400 Malus domestica HOM05D000002 ORTHO05D000001 7.0e-10 67.8 93 37.6
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-10 67.8 93 35.5
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-09 66.6 105 36.2
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 2.7e-09 65.9 93 40.9
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-09 65.5 97 38.1
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-09 65.5 97 38.1
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.9e-09 64.7 112 32.1
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 63.2 114 31.6
FvH4_3g39581 Fragaria vesca HOM05D000002 ORTHO05D000001 3.8e-08 62.0 87 39.1
Hma1.2p1_0252F.1_g102700 Hydrangea macrophylla HOM05D000002 ORTHO05D012706 5.0e-08 61.6 121 32.2
MD04G1151700 Malus domestica HOM05D000002 ORTHO05D000001 6.5e-08 61.2 98 34.7
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 6.5e-08 61.2 92 35.9
Atru.chr11.277 Acer truncatum HOM05D000002 ORTHO05D000001 8.5e-08 60.8 107 33.6
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 127 29.9
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 117 31.6
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 127 29.9
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 117 31.6
Potri.003G014176 Populus trichocarpa HOM05D000002 ORTHO05D010776 1.1e-07 60.5 107 35.5
Sopen01g010690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.5 106 36.8
Sopen01g012150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.5 106 37.7
Sopen11g014180 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 60.1 106 36.8
Sopen01g050910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen03g026870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen03g027590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen08g016690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen08g017760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen10g019670 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen10g024340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen11g006290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
Sopen11g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 106 36.8
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-07 59.3 125 30.4
Hma1.2p1_1172F.1_g263570 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-07 58.9 113 35.4
Sabra18G0022200 Salix brachista HOM05D000002 ORTHO05D000001 3.2e-07 58.9 96 36.5
C08p15500 Brassica napus HOM05D000002 ORTHO05D000075 5.5e-07 58.2 115 31.3
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-07 58.2 125 28.0
Ah.11g039570 Amaranthus hybridus HOM05D000002 ORTHO05D000001 7.2e-07 57.8 121 31.4
Sed0014353 Sechium edule HOM05D000002 ORTHO05D000001 9.4e-07 57.4 51 43.1
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 56.6 101 32.7
Potri.005G161366 Populus trichocarpa HOM05D000002 ORTHO05D010776 1.6e-06 56.6 118 34.7
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-06 56.6 115 31.3
RcHm_v2.0_Chr1g0313671 Rosa chinensis HOM05D000002 ORTHO05D017145 1.6e-06 56.6 85 32.9
Hma1.2p1_0240F.1_g100220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-06 56.2 77 40.3
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 56.2 79 38.0
Sopen01g028900 Solanum pennellii HOM05D000319 ORTHO05D010858 2.1e-06 56.2 109 33.9
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 56.2 110 29.1
Sp1g37055 Schrenkiella parvula HOM05D000002 ORTHO05D000001 3.6e-06 55.5 116 31.0
MD05G1320000 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-06 55.1 87 35.6
Hma1.2p1_0944F.1_g239940 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.1e-06 54.7 101 33.7
MD09G1228400 Malus domestica HOM05D025337 ORTHO05D015670 6.1e-06 54.7 124 26.6
Psat3g114760 Pisum sativum HOM05D000002 ORTHO05D000001 6.1e-06 54.7 114 30.7
QL09p024580 Quercus lobata HOM05D000002 ORTHO05D000001 6.1e-06 54.7 90 34.4
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 6.1e-06 54.7 119 32.8
FvH4_5g38691 Fragaria vesca HOM05D000002 ORTHO05D000001 8.0e-06 54.3 87 36.8
RcHm_v2.0_Chr1g0344491 Rosa chinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 81 34.6


User provided reference genes

Program Settings