Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023488 Sechium edule HOM05D019571 ORTHO05D012329 1.7e-94 349.4 178 100.0
Sed0017979 Sechium edule HOM05D019571 ORTHO05D012329 1.5e-71 273.1 178 79.8
Sed0006425 Sechium edule HOM05D019571 ORTHO05D012329 7.1e-61 237.7 178 65.7
MELO3C025616.2 Cucumis melo HOM05D019571 ORTHO05D012329 4.6e-60 235.0 178 67.4
CsaV3_4G033390 Cucumis sativus L. HOM05D019571 ORTHO05D012329 4.0e-56 221.9 178 64.6
Nn2g14817 Nelumbo nucifera HOM05D012307 ORTHO05D012329 1.4e-21 107.1 178 33.7
Sabra11G0100700 Salix brachista HOM05D012307 ORTHO05D012329 1.8e-16 90.1 159 37.1
Potri.011G114700 Populus trichocarpa HOM05D012307 ORTHO05D012329 5.0e-14 82.0 182 34.1
Gohir.D11G306700 Gossypium hirsutum HOM05D012307 ORTHO05D012329 1.4e-11 73.9 153 29.4
TAR626G1177 Trochodendron aralioides HOM05D019571 ORTHO05D012329 1.8e-11 73.6 130 33.1
Gohir.D11G306600 Gossypium hirsutum HOM05D012307 ORTHO05D012329 2.6e-10 69.7 153 28.1
Gohir.D11G306800 Gossypium hirsutum HOM05D012307 ORTHO05D012329 5.7e-10 68.6 153 28.1
Gorai.007G325300 Gossypium raimondii HOM05D012307 ORTHO05D012329 5.7e-10 68.6 153 28.1
Gorai.007G325400 Gossypium raimondii HOM05D012307 ORTHO05D012329 1.3e-09 67.4 152 28.3
EL10Ac5g10648 Beta vulgaris HOM05D039611 ORTHO05D012329 5.3e-08 62.0 182 28.6
RcHm_v2.0_Chr2g0120401 Rosa chinensis HOM05D004113 ORTHO05D005233 2.0e-07 60.1 172 26.2
Sc03g0007820 Simmondsia chinensis HOM05D064863 ORTHO05D015597 2.0e-07 60.1 180 26.1
QL04p077228 Quercus lobata HOM05D007968 ORTHO05D010203 2.6e-07 59.7 148 27.0
FvH4_1g24160 Fragaria vesca HOM05D004113 ORTHO05D005233 4.5e-07 58.9 153 26.1
FAN19G1994 Fragaria x ananassa HOM05D004113 ORTHO05D005233 4.5e-07 58.9 153 26.1
FAN26G3157 Fragaria x ananassa HOM05D004113 ORTHO05D005233 4.5e-07 58.9 153 26.1
Sabra07G0056100 Salix brachista HOM05D007968 ORTHO05D010203 4.5e-07 58.9 137 25.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 5.9e-07 58.5 172 26.2
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 1.7e-06 57.0 153 24.8
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-06 57.0 167 26.3
FAN16G3582 Fragaria x ananassa HOM05D004113 ORTHO05D005233 2.2e-06 56.6 153 25.5
CDE10G0993 Ceratophyllum demersum HOM05D022876 ORTHO05D024919 2.9e-06 56.2 126 27.8
Gohir.D11G306603 Gossypium hirsutum HOM05D012307 ORTHO05D012329 2.9e-06 56.2 152 27.6
AUR62008137 Chenopodium quinoa HOM05D039611 ORTHO05D012329 3.8e-06 55.8 144 29.9
Duzib170G0614 Durio zibethinus HOM05D012307 ORTHO05D012329 3.8e-06 55.8 95 31.6
Gorai.007G325200 Gossypium raimondii HOM05D012307 ORTHO05D012329 3.8e-06 55.8 75 36.0
CDE06G2163 Ceratophyllum demersum HOM05D022876 ORTHO05D024919 6.5e-06 55.1 130 28.5
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.5e-06 55.1 147 29.3
Thecc.01G163500 Theobroma cacao HOM05D024611 ORTHO05D020423 6.5e-06 55.1 148 25.0
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 8.5e-06 54.7 173 27.2
FAN28G2384 Fragaria x ananassa HOM05D004113 ORTHO05D005233 8.5e-06 54.7 153 25.5
Thecc.07G098500 Theobroma cacao HOM05D012307 ORTHO05D012329 8.5e-06 54.7 168 27.4


User provided reference genes

Program Settings