Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 2.0e-42 175.3 83 100.0
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 2.0e-42 175.3 83 100.0
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 2.0e-42 175.3 83 100.0
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 2.0e-42 175.3 83 100.0
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 3.2e-40 167.9 83 96.4
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 4.2e-40 167.5 83 96.4
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 5.5e-40 167.2 83 95.2
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 9.4e-40 166.4 83 95.2
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 9.4e-40 166.4 83 95.2
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 1.4e-38 162.5 81 95.1
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 2.5e-37 158.3 77 97.4
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.3e-37 157.9 78 94.9
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.8e-35 152.1 78 91.0
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 7.2e-32 140.2 79 87.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.9e-30 134.4 63 100.0
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 3.9e-30 134.4 63 100.0
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 3.9e-30 134.4 63 100.0
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 3.9e-30 134.4 63 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.6e-29 131.7 75 86.7
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.7e-28 129.0 81 76.5
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 1.1e-27 126.3 62 95.2
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-27 126.3 62 95.2
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 2.6e-26 121.7 59 94.9
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 3.5e-26 121.3 62 91.9
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-24 116.3 57 96.5
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.5e-24 115.9 54 100.0
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 4.0e-22 107.8 54 94.4
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 4.0e-22 107.8 54 94.4
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 4.0e-22 107.8 54 94.4
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 4.0e-22 107.8 54 94.4
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 6.7e-22 107.1 52 94.2
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.7e-22 107.1 52 94.2
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.7e-22 107.1 52 94.2
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.1e-21 106.3 49 100.0
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 1.5e-21 105.9 55 92.7
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 5.7e-21 104.0 70 72.9
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 4.1e-19 97.8 63 77.8
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 5.3e-19 97.4 53 88.7
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 5.3e-19 97.4 52 90.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 1.2e-18 96.3 50 88.0
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.0e-17 93.2 71 69.0
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 1.0e-17 93.2 52 86.5
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 1.2e-15 86.3 41 95.1
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-15 86.3 41 95.1
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.2e-15 86.3 52 82.7
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.6e-15 84.7 51 82.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.7e-15 84.3 52 78.8
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 8.0e-15 83.6 47 85.1
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 1.4e-14 82.8 52 78.8
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.0e-13 79.0 40 90.0
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 2.0e-13 79.0 44 84.1
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.2e-12 75.5 51 74.5
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 2.2e-12 75.5 36 97.2
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.3e-12 73.9 45 82.2
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 7.0e-11 70.5 35 91.4
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 7.7e-10 67.0 45 71.1
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.0e-09 66.6 36 88.9
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 2.2e-09 65.5 34 88.2
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 2.9e-09 65.1 53 66.0
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 3.8e-09 64.7 37 81.1
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 5.0e-09 64.3 73 53.4
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.0e-09 64.3 51 64.7
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 5.5e-08 60.8 72 55.6
Lalb_Chr08g0236231 Lupinus albus HOM05D001966 ORTHO05D010986 5.5e-08 60.8 32 87.5
Lalb_Chr24g0400891 Lupinus albus HOM05D001966 ORTHO05D010986 5.5e-08 60.8 32 87.5
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-07 59.7 33 81.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-07 59.7 55 61.8
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 4.0e-06 54.7 28 89.3


User provided reference genes

Program Settings