Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 1.7e-48 195.7 97 100.0
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 4.2e-31 137.9 95 78.9
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 1.3e-27 126.3 95 74.7
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 2.4e-23 112.1 95 68.4
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 4.2e-15 84.7 97 53.6
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 7.1e-15 84.0 97 53.6
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.2e-14 83.2 97 55.7
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.0e-14 80.9 101 52.5
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 2.3e-13 79.0 99 52.5
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 3.0e-13 78.6 99 50.5
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.0e-13 78.6 101 50.5
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 5.1e-13 77.8 97 51.5
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 6.7e-13 77.4 97 52.6
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 6.7e-13 77.4 98 49.0
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.7e-13 77.0 87 54.0
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 1.1e-12 76.6 97 53.6
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 1.1e-12 76.6 97 49.5
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 1.1e-12 76.6 97 50.5
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 1.5e-12 76.3 102 49.0
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.9e-12 75.9 98 50.0
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.9e-12 75.9 98 50.0
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 2.5e-12 75.5 98 54.1
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 3.3e-12 75.1 97 48.5
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 3.3e-12 75.1 83 47.0
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.3e-12 74.7 97 47.4
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 4.3e-12 74.7 90 50.0
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 4.3e-12 74.7 100 54.0
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 5.7e-12 74.3 87 52.9
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 7.4e-12 73.9 98 49.0
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 1.3e-11 73.2 93 49.5
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 1.6e-11 72.8 90 46.7
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 1.6e-11 72.8 101 48.5
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 1.6e-11 72.8 89 50.6
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 1.6e-11 72.8 96 46.9
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 1.6e-11 72.8 101 48.5
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 2.2e-11 72.4 97 46.4
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 2.8e-11 72.0 97 47.4
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 2.8e-11 72.0 98 49.0
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.8e-11 72.0 99 46.5
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.8e-11 72.0 91 45.1
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.7e-11 71.6 69 55.1
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 3.7e-11 71.6 87 48.3
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.8e-11 71.2 91 47.3
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 4.8e-11 71.2 97 50.5
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 4.8e-11 71.2 98 46.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 6.3e-11 70.9 94 47.9
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 8.2e-11 70.5 90 43.3
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.1e-10 70.1 46 67.4
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.1e-10 70.1 55 61.8
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.1e-10 70.1 91 44.0
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 1.1e-10 70.1 92 44.6
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 1.4e-10 69.7 98 44.9
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.8e-10 69.3 69 58.0
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.8e-10 69.3 101 46.5
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 1.8e-10 69.3 91 46.2
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 2.4e-10 68.9 87 42.5
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 3.1e-10 68.6 97 46.4
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 4.1e-10 68.2 98 45.9
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 4.1e-10 68.2 91 44.0
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 9.0e-10 67.0 84 45.2
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 1.2e-09 66.6 65 52.3
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 1.2e-09 66.6 87 46.0
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 2.0e-09 65.9 87 44.8
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.4e-09 65.1 97 47.4
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 5.9e-09 64.3 88 46.6
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 5.9e-09 64.3 92 44.6
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 5.9e-09 64.3 101 48.5
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.0e-08 63.5 89 42.7
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.0e-08 63.5 89 42.7
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 1.3e-08 63.2 105 41.9
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.7e-08 62.8 85 44.7
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 1.7e-08 62.8 101 47.5
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.7e-08 62.8 89 42.7
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 2.2e-08 62.4 97 42.3
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.2e-08 62.4 86 45.3
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 2.2e-08 62.4 88 46.6
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 5.0e-08 61.2 97 37.1
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 8.5e-08 60.5 95 42.1
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.1e-07 60.1 105 41.9
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 1.4e-07 59.7 89 43.8
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 1.4e-07 59.7 62 53.2
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.9e-07 59.3 100 44.0
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 2.5e-07 58.9 95 43.2
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.2e-07 58.5 97 42.3
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 3.2e-07 58.5 89 41.6
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 5.5e-07 57.8 89 44.9
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 5.5e-07 57.8 49 61.2
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 9.3e-07 57.0 97 38.1
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 9.3e-07 57.0 97 35.1
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 1.6e-06 56.2 97 39.2
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 1.6e-06 56.2 97 39.2
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 2.1e-06 55.8 95 37.9
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 3.6e-06 55.1 97 38.1
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 3.6e-06 55.1 97 38.1
Os11g0323860 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 3.6e-06 55.1 84 39.3
Os11g0412484 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 3.6e-06 55.1 84 39.3
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 4.6e-06 54.7 97 37.1
BolC1t00407H Brassica oleracea HOM05D006691 ORTHO05D007620 4.6e-06 54.7 32 65.6
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 4.6e-06 54.7 88 35.2
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 6.1e-06 54.3 97 44.3
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 6.1e-06 54.3 97 38.1
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 6.1e-06 54.3 96 37.5
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 6.1e-06 54.3 32 65.6
CDE06G1180 Ceratophyllum demersum HOM05D006691 ORTHO05D007620 7.9e-06 53.9 34 67.6


User provided reference genes

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