Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 4.8e-146 521.2 264 100.0
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 4.8e-130 468.0 264 87.5
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.4e-129 466.5 264 87.1
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 6.1e-117 424.5 243 86.4
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 3.7e-90 335.5 252 67.1
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 8.3e-90 334.3 259 66.0
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 9.1e-89 330.9 259 64.5
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 1.2e-88 330.5 260 65.4
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 4.2e-86 322.0 253 64.8
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 1.2e-85 320.5 253 62.8
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 8.3e-82 307.8 253 62.1
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 9.2e-81 304.3 260 59.2
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.2e-80 303.9 260 60.4
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.7e-79 300.1 254 60.2
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 3.8e-79 298.9 260 58.5
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 5.0e-79 298.5 250 59.2
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 6.6e-79 298.1 260 59.6
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 2.5e-78 296.2 259 59.5
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 3.3e-78 295.8 259 57.9
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 1.6e-77 293.5 253 61.3
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.8e-77 292.7 260 57.3
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 3.6e-77 292.4 254 63.8
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 4.7e-77 292.0 260 58.5
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 6.1e-77 291.6 241 61.0
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.4e-76 290.4 251 61.8
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 1.8e-76 290.0 251 61.4
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 2.3e-76 289.7 260 58.1
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 3.0e-76 289.3 251 57.8
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 4.0e-76 288.9 257 60.7
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.2e-75 287.3 254 59.4
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 2.6e-75 286.2 230 64.8
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 5.7e-75 285.0 250 60.0
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.3e-74 283.9 246 61.0
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 2.2e-74 283.1 251 58.6
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 2.4e-73 279.6 251 58.6
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.2e-72 277.3 251 58.2
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.6e-72 276.9 260 58.5
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 3.5e-72 275.8 251 60.6
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.0e-71 274.2 262 54.2
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.1e-70 270.8 253 57.7
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 1.5e-70 270.4 261 56.3
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.9e-70 270.0 249 56.2
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 2.5e-70 269.6 257 57.2
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 3.3e-70 269.2 250 58.0
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 9.5e-70 267.7 249 57.8
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.2e-69 267.3 253 55.3
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 2.1e-69 266.5 250 55.6
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 2.8e-69 266.2 293 51.5
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 4.7e-69 265.4 250 57.6
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.0e-68 264.2 238 58.8
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.4e-68 263.8 241 56.8
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.3e-68 263.1 250 52.0
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 2.3e-68 263.1 250 52.4
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.3e-68 263.1 250 51.6
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 4.0e-68 262.3 248 53.2
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 4.0e-68 262.3 250 52.8
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 5.2e-68 261.9 229 59.8
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 6.8e-68 261.5 251 50.6
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.9e-68 261.2 259 54.4
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.2e-67 260.8 233 60.1
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.2e-67 260.8 213 62.0
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 1.5e-67 260.4 263 49.0
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.5e-67 260.4 260 54.2
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 3.4e-67 259.2 245 51.4
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 4.4e-67 258.8 250 53.6
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 4.4e-67 258.8 250 52.4
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 4.4e-67 258.8 251 50.2
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 7.5e-67 258.1 245 50.6
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 7.5e-67 258.1 245 50.6
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 7.5e-67 258.1 245 50.6
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 9.8e-67 257.7 253 53.4
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 1.3e-66 257.3 250 51.2
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.3e-66 257.3 244 55.3
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.3e-66 257.3 243 54.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.7e-66 256.9 260 53.8
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 6.4e-66 255.0 256 53.9
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 9.2e-65 251.1 222 58.6
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 9.2e-65 251.1 248 54.8
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 3.5e-64 249.2 250 50.4
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 3.5e-64 249.2 250 50.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 7.8e-64 248.1 249 51.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 8.6e-63 244.6 241 52.7
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.1e-62 244.2 241 52.3
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 9.5e-62 241.1 254 50.8
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 3.6e-61 239.2 276 44.9
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 6.2e-61 238.4 250 49.2
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.2e-59 234.2 238 50.8
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.3e-58 230.7 229 50.7
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 8.3e-58 228.0 254 48.0
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.4e-57 226.5 189 56.1
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 5.4e-57 225.3 251 50.2
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 2.7e-56 223.0 249 48.6
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 6.0e-56 221.9 259 49.4
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 8.6e-55 218.0 253 44.3
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 6.2e-53 211.8 188 56.9
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 7.6e-51 204.9 225 50.2
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 6.6e-47 191.8 340 37.6
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.5e-46 190.7 171 58.5
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 3.3e-46 189.5 174 56.3
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 4.0e-44 182.6 245 45.3
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.2e-43 181.0 148 55.4
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 2.3e-39 166.8 135 64.4
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 2.7e-32 143.3 110 62.7
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 3.1e-28 129.8 247 36.4
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 2.1e-24 117.1 137 46.7
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.0e-23 114.8 117 53.0
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.0e-23 114.8 117 53.0
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.1e-22 111.3 95 51.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 1.2e-19 101.3 155 44.5
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 3.4e-19 99.8 199 29.6
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 7.1e-17 92.0 207 33.8
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 2.1e-13 80.5 155 34.8
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 1.1e-12 78.2 79 53.2
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.2e-11 74.7 97 45.4
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.5e-11 72.8 88 48.9


User provided reference genes

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