Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023384 Sechium edule HOM05D005524 ORTHO05D005392 8.8e-29 129.8 75 100.0
ClCG10G012450 Citrullus lanatus HOM05D005524 ORTHO05D005392 1.1e-10 69.7 54 79.6
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.3e-08 62.8 53 69.8
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 1.3e-08 62.8 53 69.8
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 1.3e-08 62.8 53 69.8
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 2.2e-08 62.0 53 71.7
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 2.2e-08 62.0 53 71.7
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 2.2e-08 62.0 53 71.7
CsaV3_3G032220 Cucumis sativus L. HOM05D005524 ORTHO05D005392 2.2e-08 62.0 54 74.1
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 2.9e-08 61.6 53 69.8
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 5.0e-08 60.8 53 67.9
SHI24452 Sapria himalayana HOM05D005524 ORTHO05D005392 5.0e-08 60.8 59 66.1
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 6.5e-08 60.5 53 67.9
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 6.5e-08 60.5 53 67.9
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 8.5e-08 60.1 53 67.9
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 8.5e-08 60.1 53 67.9
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 1.1e-07 59.7 53 66.0
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 1.9e-07 58.9 54 64.8
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 2.5e-07 58.5 54 64.8
Aa31LG10G12450 Aethionema arabicum HOM05D005524 ORTHO05D005392 3.2e-07 58.2 53 67.9
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 5.5e-07 57.4 53 67.9
Phvul.001G137100 Phaseolus vulgaris HOM05D005524 ORTHO05D005392 7.2e-07 57.0 54 59.3
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 7.2e-07 57.0 52 67.3
Sed0007200 Sechium edule HOM05D005524 ORTHO05D005392 7.2e-07 57.0 55 67.3
Sed0003541 Sechium edule HOM05D005524 ORTHO05D005392 2.1e-06 55.5 54 66.7
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.7e-06 55.1 52 65.4
Sed0016248 Sechium edule HOM05D005524 ORTHO05D005392 2.7e-06 55.1 54 66.7
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 3.6e-06 54.7 56 64.3
ClCG09G004270 Citrullus lanatus HOM05D005524 ORTHO05D005392 8.0e-06 53.5 54 64.8


User provided reference genes

Program Settings