Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 7.7e-61 236.9 113 100.0
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 9.4e-51 203.4 112 83.9
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 2.1e-50 202.2 112 83.9
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.6e-48 195.3 125 78.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.6e-42 176.0 102 76.5
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.6e-42 176.0 102 76.5
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.1e-42 174.1 113 68.1
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.4e-41 172.9 100 76.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.4e-41 172.9 111 69.4
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.8e-41 172.6 112 70.5
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 6.8e-41 170.6 100 74.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 6.8e-41 170.6 113 66.4
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.2e-40 169.9 112 68.8
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 2.0e-40 169.1 103 72.8
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.6e-40 168.7 113 65.5
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 3.4e-40 168.3 113 69.0
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 3.4e-40 168.3 106 68.9
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 7.5e-40 167.2 106 67.9
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.3e-39 166.4 103 68.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.3e-39 166.4 111 64.0
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.7e-39 166.0 102 71.6
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.8e-39 165.2 106 68.9
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.8e-39 164.5 112 67.0
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 6.3e-39 164.1 111 63.1
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 6.3e-39 164.1 113 65.5
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.8e-38 162.5 106 66.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 3.1e-38 161.8 102 68.6
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 4.1e-38 161.4 102 66.7
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 5.4e-38 161.0 101 66.3
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 7.0e-38 160.6 100 68.0
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.2e-37 159.8 106 68.9
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 2.0e-37 159.1 101 69.3
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 3.5e-37 158.3 103 70.9
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.5e-37 158.3 113 61.9
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 4.5e-37 157.9 102 64.7
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 5.9e-37 157.5 102 64.7
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 7.7e-37 157.1 105 66.7
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 7.7e-37 157.1 112 63.4
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.0e-36 156.8 112 62.5
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.7e-36 156.0 113 61.9
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 2.2e-36 155.6 105 67.6
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 2.2e-36 155.6 113 61.9
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 2.9e-36 155.2 113 61.1
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 2.9e-36 155.2 113 61.1
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.9e-36 155.2 117 64.1
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.8e-36 154.8 113 61.1
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 3.8e-36 154.8 113 59.3
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 5.0e-36 154.5 118 60.2
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 8.5e-36 153.7 110 62.7
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.1e-35 153.3 102 65.7
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-35 153.3 113 60.2
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.1e-35 153.3 113 60.2
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.9e-35 152.5 102 64.7
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.9e-35 152.5 105 68.6
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 1.9e-35 152.5 103 64.1
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.9e-35 152.5 106 65.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.5e-35 152.1 111 59.5
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 3.2e-35 151.8 103 64.1
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 4.2e-35 151.4 105 61.9
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 4.2e-35 151.4 113 60.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.2e-35 151.4 148 50.7
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.2e-35 151.4 115 60.0
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 4.2e-35 151.4 98 65.3
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 7.2e-35 150.6 103 63.1
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 7.2e-35 150.6 103 63.1
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 7.2e-35 150.6 103 63.1
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 7.2e-35 150.6 98 65.3
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 9.5e-35 150.2 113 62.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 9.5e-35 150.2 103 62.1
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 9.5e-35 150.2 117 61.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.2e-34 149.8 95 66.3
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-34 149.8 95 67.4
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.2e-34 149.8 105 64.8
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 1.6e-34 149.4 112 62.5
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 101 66.3
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 103 65.0
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.1e-34 149.1 95 66.3
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.8e-34 148.7 103 61.2
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.6e-34 148.3 100 62.0
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.1e-34 147.5 95 65.3
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 6.1e-34 147.5 105 64.8
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.4e-33 146.4 101 64.4
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.4e-33 146.4 98 63.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.4e-33 146.4 94 68.1
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.3e-33 145.6 103 63.1
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.0e-33 145.2 96 62.5
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 4.0e-33 144.8 95 65.3
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 4.0e-33 144.8 95 65.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 4.0e-33 144.8 99 64.6
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 4.0e-33 144.8 93 66.7
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 6.8e-33 144.1 95 65.3
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 6.8e-33 144.1 101 65.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.5e-32 142.9 97 64.9
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.8e-31 138.7 111 59.5
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 3.7e-31 138.3 90 64.4
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 5.0e-28 127.9 77 71.4
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 5.6e-27 124.4 103 58.3
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 9.5e-27 123.6 103 49.5
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.2e-26 123.2 79 69.6
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 3.0e-25 118.6 79 65.8
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 3.0e-25 118.6 68 77.9
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.5e-24 116.3 81 64.2
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 3.7e-23 111.7 68 69.1
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.1e-22 110.2 81 64.2
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 7.0e-22 107.5 96 53.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 7.8e-21 104.0 69 69.6
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.0e-20 103.6 69 71.0
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 2.3e-20 102.4 95 48.4
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 3.0e-20 102.1 101 48.5
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 3.9e-20 101.7 78 60.3
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.9e-19 99.4 113 47.8
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 7.3e-19 97.4 85 52.9
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 7.5e-16 87.4 62 61.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.2e-15 85.9 104 46.2
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.1e-14 83.6 61 59.0
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 3.2e-14 82.0 91 44.0
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 4.3e-11 71.6 44 72.7
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.4e-09 66.6 62 45.2


User provided reference genes

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