Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 9.2e-136 486.9 244 100.0
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 1.3e-105 386.7 247 76.9
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 5.4e-104 381.3 247 76.1
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 5.8e-98 361.3 292 65.8
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.8e-70 270.0 243 53.1
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 1.3e-68 263.8 244 52.5
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 4.8e-68 261.9 244 51.2
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 7.0e-67 258.1 245 51.8
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 4.5e-66 255.4 244 51.2
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 1.3e-65 253.8 245 50.6
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 2.9e-65 252.7 245 50.2
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 1.9e-64 250.0 244 50.0
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 3.2e-64 249.2 244 51.2
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.2e-64 249.2 244 51.2
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 5.5e-64 248.4 244 47.1
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.2e-63 247.3 245 49.4
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 1.2e-63 247.3 244 48.8
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.6e-63 245.7 244 50.8
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 8.0e-63 244.6 244 50.4
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.4e-62 243.8 244 50.4
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.4e-62 243.8 244 50.0
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 1.8e-62 243.4 244 47.5
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 1.1e-61 240.7 245 49.0
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.1e-61 240.7 244 50.0
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 1.7e-60 236.9 244 46.7
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 2.2e-60 236.5 244 47.1
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.1e-59 234.2 244 48.0
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 2.4e-59 233.0 243 49.0
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 5.9e-58 228.4 245 45.3
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 7.7e-58 228.0 244 47.5
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.7e-57 226.9 244 45.9
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 2.2e-57 226.5 244 46.3
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 3.8e-57 225.7 244 47.5
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 8.5e-57 224.6 245 45.3
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 1.1e-56 224.2 244 47.5
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 2.5e-56 223.0 221 49.8
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 7.2e-56 221.5 244 45.1
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 1.0e-54 217.6 244 45.9
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 1.8e-54 216.9 244 46.7
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.8e-54 216.9 244 41.8
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 6.7e-54 214.9 244 44.3
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 5.7e-53 211.8 244 42.2
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 9.7e-53 211.1 248 46.0
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 1.3e-52 210.7 244 41.4
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 1.3e-52 210.7 244 41.4
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.7e-52 210.3 244 41.8
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 3.7e-52 209.1 234 42.7
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 4.8e-52 208.8 245 43.3
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 6.3e-52 208.4 245 43.3
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 6.3e-52 208.4 246 42.7
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 1.1e-51 207.6 244 43.0
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 1.1e-51 207.6 244 43.0
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 2.4e-51 206.5 244 41.8
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 3.1e-51 206.1 244 42.6
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 3.1e-51 206.1 244 43.0
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 4.1e-51 205.7 244 41.0
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 5.3e-51 205.3 244 41.0
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 7.0e-51 204.9 244 43.4
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 2.7e-50 203.0 244 41.8
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 2.7e-50 203.0 244 41.8
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 1.3e-49 200.7 246 41.9
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 3.8e-49 199.1 245 43.3
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 6.5e-49 198.4 246 40.7
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 8.5e-49 198.0 244 40.6
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.9e-48 196.8 244 42.6
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 5.5e-48 195.3 246 42.3
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 9.4e-48 194.5 246 41.5
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 1.2e-47 194.1 203 47.3
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.6e-47 193.7 244 43.0
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 1.0e-46 191.0 267 37.8
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.4e-46 190.7 239 43.1
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.8e-46 190.3 245 43.3
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 2.2e-44 183.3 244 41.8
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 1.1e-43 181.0 176 51.7
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 2.4e-43 179.9 207 44.4
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 5.4e-43 178.7 244 39.3
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 9.1e-43 177.9 244 41.4
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 1.3e-41 174.1 202 43.1
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 2.9e-41 172.9 175 50.9
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 1.9e-40 170.2 190 46.8
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.9e-40 170.2 170 49.4
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 4.0e-38 162.5 204 44.1
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 4.4e-37 159.1 251 36.3
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 9.8e-37 157.9 249 37.8
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 9.8e-37 157.9 251 36.3
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.3e-36 157.5 251 35.9
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 1.7e-36 157.1 242 34.3
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.2e-36 156.8 248 35.5
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 2.4e-35 153.3 217 38.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 3.5e-34 149.4 259 34.7
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 5.9e-34 148.7 252 36.5
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.0e-33 147.9 244 33.2
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.1e-27 127.9 247 33.2
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 4.1e-27 125.9 241 34.0
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 5.4e-27 125.6 175 37.7
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 6.0e-26 122.1 74 78.4
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 2.3e-25 120.2 239 29.7
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 8.0e-23 111.7 158 38.6
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 1.5e-13 80.9 93 43.0
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 2.0e-13 80.5 71 54.9
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 2.5e-08 63.5 69 43.5
MBI14_g37361_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 4.0e-06 56.2 44 59.1


User provided reference genes

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