Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 4.7e-177 624.4 311 100.0
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.3e-139 500.0 307 81.4
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 6.6e-139 497.7 307 81.8
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 3.3e-138 495.4 308 80.5
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 3.0e-99 365.9 291 64.6
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 1.1e-98 364.0 289 64.4
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.3e-94 350.5 271 64.9
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.9e-94 349.4 281 63.0
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 8.5e-94 347.8 318 56.9
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.1e-93 347.4 286 59.8
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 7.2e-93 344.7 286 59.4
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 9.4e-93 344.4 300 60.3
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.2e-92 344.0 292 62.3
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 2.7e-92 342.8 273 61.2
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.4e-91 340.5 286 60.8
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.8e-91 340.1 280 62.1
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 3.9e-91 339.0 275 62.5
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 8.8e-91 337.8 286 60.8
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.1e-90 337.4 290 60.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 3.3e-90 335.9 297 55.2
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 4.4e-90 335.5 295 56.9
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 5.7e-90 335.1 284 59.2
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 2.2e-89 333.2 293 56.0
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 2.2e-89 333.2 298 57.0
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.2e-89 333.2 279 60.6
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.8e-89 332.8 285 60.4
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 8.2e-89 331.3 285 60.0
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.4e-88 330.5 280 60.7
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.4e-88 330.5 278 57.2
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.8e-88 330.1 278 57.6
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 9.1e-88 327.8 275 60.0
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 9.1e-88 327.8 292 57.9
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.2e-87 327.4 274 58.0
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 1.6e-87 327.0 299 56.5
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 4.5e-87 325.5 302 55.3
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 5.9e-87 325.1 269 58.0
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 2.2e-86 323.2 282 56.4
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.5e-85 320.5 285 59.3
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.5e-85 319.7 278 60.8
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 5.5e-85 318.5 278 60.4
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 9.4e-85 317.8 276 56.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.6e-84 317.0 275 55.3
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.7e-84 316.2 294 56.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.1e-84 315.1 278 58.6
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.8e-83 313.5 285 54.7
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.8e-83 313.5 289 55.4
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.2e-82 310.8 274 58.4
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 3.4e-82 309.3 278 55.4
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.3e-81 307.4 288 58.0
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 2.5e-77 293.1 286 56.6
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 5.5e-77 292.0 294 51.4
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.2e-76 290.8 291 54.0
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 6.8e-75 285.0 281 56.2
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 4.9e-73 278.9 292 54.1
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 7.0e-72 275.0 291 50.2
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 3.5e-71 272.7 299 50.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 5.9e-71 271.9 275 53.1
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 2.1e-68 263.5 288 50.0
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 4.7e-68 262.3 267 54.7
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 1.2e-66 257.7 291 51.5
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 5.7e-66 255.4 220 57.3
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.0e-54 218.0 161 63.4
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 6.6e-54 215.3 205 54.1
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.1e-51 208.0 272 45.6
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 1.5e-45 187.6 137 66.4
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 6.6e-38 162.2 117 67.5
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 6.2e-36 155.6 226 42.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 3.5e-31 139.8 148 51.4
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 8.7e-30 135.2 309 32.0
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.2e-25 120.6 82 68.3
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.6e-23 114.4 296 36.5
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.6e-23 114.4 121 53.7
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.3e-13 80.1 57 57.9
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 4.5e-10 69.7 75 48.0
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.5e-08 63.9 79 46.8


User provided reference genes

Program Settings