Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023192 Sechium edule HOM05D007109 ORTHO05D008813 1.1e-162 576.6 304 100.0
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 3.4e-103 379.0 303 70.3
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 2.8e-97 359.4 306 67.6
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 2.3e-88 329.7 300 64.7
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 1.2e-87 327.4 307 63.5
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 6.4e-54 215.3 305 44.3
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 3.3e-50 203.0 310 40.3
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 2.1e-49 200.3 319 43.9
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 2.4e-48 196.8 310 41.0
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 3.1e-48 196.4 310 42.3
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 3.1e-48 196.4 308 39.9
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 6.5e-46 188.7 312 39.4
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 6.5e-46 188.7 307 40.4
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 5.5e-45 185.7 309 42.1
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 2.7e-44 183.3 319 41.7
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 3.0e-43 179.9 319 41.4
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 3.0e-43 179.9 319 41.4
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 3.9e-43 179.5 318 39.0
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 6.7e-43 178.7 306 38.6
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.1e-42 177.9 309 38.5
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 1.9e-42 177.2 308 41.9
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 1.9e-42 177.2 321 41.1
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 3.3e-42 176.4 318 38.7
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 6.2e-41 172.2 330 36.4
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 1.1e-40 171.4 295 39.7
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 1.4e-40 171.0 291 39.2
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 9.0e-40 168.3 308 37.0
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.2e-39 167.9 290 38.6
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 1.2e-39 167.9 307 38.1
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 4.5e-39 166.0 309 36.2
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 3.8e-38 162.9 303 36.3
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 1.9e-37 160.6 314 38.2
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 2.5e-37 160.2 315 38.4
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 7.2e-37 158.7 278 35.3
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 7.9e-36 155.2 307 35.8
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 1.3e-35 154.5 299 36.5
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 1.8e-35 154.1 314 39.8
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.9e-35 152.9 274 38.0
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 5.1e-35 152.5 312 36.5
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 5.1e-35 152.5 311 34.7
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 6.7e-35 152.1 307 34.9
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 6.7e-35 152.1 313 36.4
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 8.7e-35 151.8 311 38.9
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 1.5e-34 151.0 282 37.2
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 2.5e-34 150.2 318 36.8
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 3.3e-34 149.8 289 32.5
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 3.3e-34 149.8 305 34.8
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 3.3e-34 149.8 315 36.2
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 9.7e-34 148.3 276 38.0
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 9.7e-34 148.3 312 35.6
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 2.2e-33 147.1 291 33.3
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 3.7e-33 146.4 329 33.7
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 8.2e-33 145.2 340 32.4
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 2.4e-32 143.7 322 35.7
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 2.4e-32 143.7 294 35.4
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 4.1e-32 142.9 309 34.6
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 5.3e-32 142.5 284 38.4
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 9.0e-32 141.7 304 33.6
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 3.4e-31 139.8 281 34.2
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 4.5e-31 139.4 311 34.4
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 1.3e-30 137.9 313 33.9
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 1.3e-30 137.9 310 34.5
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 2.2e-30 137.1 281 35.2
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 2.9e-30 136.7 296 34.8
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 5.0e-30 136.0 231 39.4
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 5.0e-30 136.0 289 32.5
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 6.5e-30 135.6 305 33.4
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 1.9e-29 134.0 303 33.3
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 9.4e-29 131.7 289 35.6
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.6e-28 129.8 299 30.1
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.6e-28 129.8 299 30.1
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 6.1e-28 129.0 274 35.8
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 1.0e-27 128.3 313 31.3
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 1.0e-27 128.3 216 38.4
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 1.8e-27 127.5 314 31.5
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 5.1e-27 125.9 287 29.6
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 5.1e-27 125.9 317 33.1
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 6.7e-27 125.6 280 33.6
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 1.1e-26 124.8 316 28.8
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 2.0e-26 124.0 312 31.4
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 9.7e-26 121.7 292 33.6
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 2.8e-25 120.2 314 31.8
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 6.3e-25 119.0 307 30.3
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 1.1e-24 118.2 290 35.5
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 1.5e-23 114.4 310 30.6
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 7.7e-23 112.1 291 34.7
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 1.0e-22 111.7 283 31.4
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 8.5e-22 108.6 316 31.3
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 3.2e-21 106.7 229 31.4
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 2.7e-20 103.6 307 30.3
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 2.7e-20 103.6 281 30.2
Medtr3g034410 Medicago truncatula HOM05D007109 ORTHO05D008813 3.9e-19 99.8 286 29.0
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 8.8e-19 98.6 316 29.7
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 7.4e-18 95.5 278 31.7
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 3.7e-17 93.2 258 26.0
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 7.0e-16 89.0 346 29.5
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 1.0e-14 85.1 300 30.0
SGA_v2.0_scaffold354G49753 Striga asiatica HOM05D007109 ORTHO05D008813 2.2e-14 84.0 296 29.4
SalBow5G4816 Salvia bowleyana HOM05D007109 ORTHO05D008813 3.2e-13 80.1 280 29.3
SalBow5G4465 Salvia bowleyana HOM05D007109 ORTHO05D008813 4.2e-13 79.7 286 29.7
CsaV3_3G031910 Cucumis sativus L. HOM05D007109 ORTHO05D008813 9.4e-13 78.6 127 37.8
Lj3g0009121 Lotus japonicus HOM05D002440 ORTHO05D002576 4.7e-12 76.3 302 28.5
Medtr3g034540 Medicago truncatula HOM05D007109 ORTHO05D008813 2.0e-10 70.9 121 33.1
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 3.3e-10 70.1 75 49.3
Psat3g108800 Pisum sativum HOM05D002440 ORTHO05D002576 2.2e-09 67.4 301 26.2
Medtr7g078700 Medicago truncatula HOM05D002440 ORTHO05D002576 2.8e-09 67.0 308 27.3
Cc00_g17880 Coffea canephora HOM05D002440 ORTHO05D002576 8.2e-09 65.5 293 26.3
Ca_00821_v3 Cicer arietinum L. HOM05D002440 ORTHO05D002576 1.8e-08 64.3 307 26.1
Glyma.09G255800 Glycine max HOM05D002440 ORTHO05D002576 2.4e-08 63.9 303 26.1
TPR.G22299 Trifolium pratense HOM05D002440 ORTHO05D002576 2.4e-08 63.9 307 26.1
Lj1g0008716 Lotus japonicus HOM05D002440 ORTHO05D002576 4.1e-08 63.2 302 24.8
VMungo1383G1374 Vigna mungo HOM05D002440 ORTHO05D002576 9.1e-08 62.0 303 24.8
ATR0782G062 Amborella trichopoda HOM05D002440 ORTHO05D008813 2.0e-07 60.8 112 35.7
arahy.Tifrunner.gnm1.ann1.PB6JBD Arachis hypogaea HOM05D002440 ORTHO05D002576 4.5e-07 59.7 307 25.7
Dinv43850 Davidia involucrata HOM05D002440 ORTHO05D002576 4.5e-07 59.7 330 24.8
Oeu054334.1 Olea europaea HOM05D002440 ORTHO05D002576 4.5e-07 59.7 301 24.9
Phvul.008G059500 Phaseolus vulgaris HOM05D002440 ORTHO05D002576 4.5e-07 59.7 302 24.5
Phvul.008G059600 Phaseolus vulgaris HOM05D002440 ORTHO05D002576 5.9e-07 59.3 307 24.4
vmacro20908 Vaccinium macrocarpon HOM05D002440 ORTHO05D002576 5.9e-07 59.3 306 22.5
AUR62004397 Chenopodium quinoa HOM05D002440 ORTHO05D002576 1.0e-06 58.5 303 23.8
AUR62022603 Chenopodium quinoa HOM05D002440 ORTHO05D002576 1.0e-06 58.5 303 24.4
Gohir.A12G100450 Gossypium hirsutum HOM05D007109 ORTHO05D008813 1.0e-06 58.5 129 34.1
Sed0022066 Sechium edule HOM05D002440 ORTHO05D002576 1.0e-06 58.5 304 27.6
SGA_v2.0_scaffold4G02292 Striga asiatica HOM05D000137 ORTHO05D002576 1.0e-06 58.5 304 24.7
Ciclev10020322m.g Citrus clementina HOM05D002440 ORTHO05D002576 1.7e-06 57.8 305 23.9
QL04p054979 Quercus lobata HOM05D002440 ORTHO05D002576 2.2e-06 57.4 304 24.0
THA.LOC104817031 Tarenaya hassleriana HOM05D002440 ORTHO05D002576 2.9e-06 57.0 303 24.4
Migut.N01457 Erythranthe guttata HOM05D002440 ORTHO05D002576 3.8e-06 56.6 302 26.8
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 8.5e-06 55.5 284 23.9
CSS0006184 Camellia sinensis var. sinensis HOM05D002440 ORTHO05D002576 8.5e-06 55.5 297 22.9
Duzib133G1249 Durio zibethinus HOM05D002440 ORTHO05D002576 8.5e-06 55.5 297 24.9


User provided reference genes

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