Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 6.8e-207 724.2 485 100.0
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 6.1e-131 471.9 490 70.8
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.2e-126 457.6 492 66.7
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 9.1e-119 431.4 490 68.2
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 4.5e-57 226.5 384 51.0
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 7.6e-57 225.7 330 53.6
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 1.3e-56 224.9 389 46.5
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.7e-56 224.6 337 49.0
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 2.2e-56 224.2 424 44.3
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.9e-56 223.8 418 47.8
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 3.8e-56 223.4 344 48.8
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 6.4e-56 222.6 416 43.8
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.1e-55 221.9 341 54.0
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.9e-55 221.1 446 46.4
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 4.6e-54 216.5 402 44.8
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 6.0e-54 216.1 393 48.3
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 2.3e-53 214.2 463 41.9
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 1.5e-52 211.5 448 48.2
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.3e-52 209.9 437 44.9
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 4.3e-52 209.9 379 49.9
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 9.6e-52 208.8 426 44.6
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 9.6e-52 208.8 426 44.6
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 9.6e-52 208.8 334 48.5
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 1.6e-51 208.0 327 56.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 2.1e-51 207.6 409 44.7
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 2.8e-51 207.2 421 50.8
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 4.8e-51 206.5 324 50.6
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 8.1e-51 205.7 373 51.2
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 8.1e-51 205.7 412 45.6
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.8e-50 204.5 316 47.5
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 2.4e-50 204.1 355 55.2
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.4e-50 204.1 325 47.1
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 3.1e-50 203.8 368 48.6
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 6.9e-50 202.6 398 45.7
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.0e-49 201.1 448 40.4
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 9.9e-49 198.7 430 42.8
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 9.9e-49 198.7 433 45.0
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 1.3e-48 198.4 410 48.5
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 2.9e-48 197.2 382 46.9
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 2.9e-48 197.2 415 43.4
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 3.8e-48 196.8 327 48.9
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 3.8e-48 196.8 510 40.0
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 8.4e-48 195.7 407 42.5
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 3.2e-47 193.7 274 50.7
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 5.5e-47 193.0 383 41.3
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 9.3e-47 192.2 329 50.2
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 9.3e-47 192.2 346 43.4
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.6e-46 191.4 488 37.3
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 3.5e-46 190.3 393 44.8
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 3.5e-46 190.3 393 44.8
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 6.0e-46 189.5 313 47.3
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 6.0e-46 189.5 408 42.2
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 1.3e-45 188.3 277 51.6
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.8e-45 188.0 405 41.2
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 3.9e-45 186.8 411 43.3
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 6.7e-45 186.0 411 40.9
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.1e-44 185.3 422 42.7
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 1.9e-44 184.5 374 42.2
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.9e-44 184.5 315 54.9
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 1.9e-44 184.5 425 42.1
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 3.3e-44 183.7 323 45.2
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 4.3e-44 183.3 397 43.6
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.6e-43 181.4 350 42.9
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 6.2e-43 179.5 489 41.3
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.1e-42 178.7 426 39.0
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.4e-42 178.3 324 40.7
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.8e-42 177.9 376 44.4
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 2.4e-42 177.6 385 44.7
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 9.0e-42 175.6 379 43.8
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 7.6e-41 172.6 421 37.8
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.7e-40 171.4 449 39.6
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 4.9e-40 169.9 325 47.4
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 4.9e-40 169.9 413 40.4
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.9e-39 167.9 409 43.8
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 2.5e-39 167.5 413 40.4
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 4.2e-39 166.8 413 40.4
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 2.1e-38 164.5 376 41.8
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.3e-37 161.8 386 42.5
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.8e-37 161.4 101 79.2
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.3e-37 161.0 476 33.2
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 3.9e-37 160.2 388 41.0
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 5.7e-36 156.4 113 72.6
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 5.7e-36 156.4 352 41.2
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 5.7e-36 156.4 344 37.2
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 9.7e-36 155.6 110 71.8
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 1.6e-35 154.8 396 34.8
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 1.6e-35 154.8 113 71.7
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 2.2e-35 154.5 352 41.2
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 1.1e-34 152.1 99 75.8
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.4e-34 151.8 377 38.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 1.4e-34 151.8 306 39.9
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 2.4e-34 151.0 251 41.4
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 9.0e-34 149.1 407 40.5
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 3.4e-33 147.1 262 42.4
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 4.5e-33 146.7 320 43.8
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 5.9e-33 146.4 124 65.3
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-32 145.2 108 71.3
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 2.2e-32 144.4 95 75.8
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 2.5e-31 141.0 473 35.3
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 7.2e-31 139.4 109 67.0
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 7.2e-31 139.4 337 47.5
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 4.6e-30 136.7 452 35.8
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 2.3e-29 134.4 116 59.5
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 8.8e-29 132.5 76 85.5
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 9.7e-28 129.0 319 34.8
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.1e-26 125.6 291 40.9
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 3.1e-26 124.0 464 29.1
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 2.9e-24 117.5 114 52.6
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 3.0e-21 107.5 85 63.5
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 3.0e-21 107.5 64 85.9
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 4.4e-20 103.6 279 38.4
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 9.7e-20 102.4 62 80.6
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 2.6e-17 94.4 351 34.2
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 2.5e-15 87.8 50 82.0
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 3.2e-15 87.4 264 39.0
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 4.2e-15 87.0 55 80.0
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 5.5e-15 86.7 51 82.4
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 3.0e-13 80.9 54 75.9
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 4.8e-11 73.6 48 68.8


User provided reference genes

Program Settings