Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 2.8e-82 308.5 155 100.0
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 3.6e-53 211.8 173 69.4
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 5.2e-52 208.0 179 66.5
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 6.4e-42 174.5 167 62.3
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 3.4e-27 125.6 118 59.3
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 3.2e-17 92.4 106 50.0
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 6.7e-15 84.7 112 47.3
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 1.6e-13 80.1 110 47.3
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 4.8e-13 78.6 120 43.3
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 1.1e-12 77.4 138 42.8
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 1.8e-12 76.6 138 42.8
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 1.8e-12 76.6 121 40.5
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 2.4e-12 76.3 111 45.9
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 4.1e-12 75.5 120 43.3
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 3.4e-11 72.4 131 38.9
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 4.5e-11 72.0 119 42.0
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 5.9e-11 71.6 140 37.9
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 5.9e-11 71.6 140 37.9
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 7.7e-11 71.2 131 40.5
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 7.7e-11 71.2 129 38.0
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 1.3e-10 70.5 123 42.3
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.2e-10 69.7 105 42.9
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 2.9e-10 69.3 130 36.9
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 2.9e-10 69.3 114 39.5
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 5.0e-10 68.6 134 37.3
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 5.0e-10 68.6 131 39.7
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 6.5e-10 68.2 144 35.4
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 8.5e-10 67.8 105 41.9
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 1.1e-09 67.4 115 40.0
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 1.4e-09 67.0 143 36.4
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 1.9e-09 66.6 137 37.2
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 5.5e-09 65.1 130 36.9
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 5.5e-09 65.1 58 55.2
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 3.6e-08 62.4 134 35.8
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.0e-07 60.8 127 37.0
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 3.0e-07 59.3 137 32.8
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 5.1e-07 58.5 132 34.1
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 6.7e-07 58.2 135 34.8
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 6.7e-07 58.2 142 35.2
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 8.8e-07 57.8 140 35.0
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 2.0e-06 56.6 109 34.9
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 2.0e-06 56.6 102 39.2
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 2.5e-06 56.2 103 34.0
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 2.5e-06 56.2 39 66.7
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 3.3e-06 55.8 104 39.4
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 5.7e-06 55.1 103 34.0
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 7.4e-06 54.7 102 34.3
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 9.7e-06 54.3 133 33.1


User provided reference genes

Program Settings