Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.6e-135 486.1 256 100.0
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 9.8e-80 300.8 252 64.3
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.6e-66 256.9 267 53.2
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.2e-61 240.7 247 53.8
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.4e-40 169.5 252 38.9
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 4.5e-40 169.1 263 38.4
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.7e-39 167.2 241 39.0
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 4.9e-39 165.6 193 46.6
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.9e-36 156.0 248 38.3
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 2.5e-35 153.3 249 38.2
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 7.4e-35 151.8 250 38.8
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.1e-34 150.2 204 44.1
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 3.1e-33 146.4 245 38.0
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 4.0e-33 146.0 241 39.4
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 2.0e-32 143.7 247 39.7
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 5.8e-32 142.1 201 41.3
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 1.3e-31 141.0 263 35.0
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 1.7e-31 140.6 256 36.7
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 2.9e-31 139.8 265 35.8
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 4.9e-31 139.0 202 42.6
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 4.9e-31 139.0 246 34.6
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.4e-31 138.7 225 36.9
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.9e-30 137.1 245 39.2
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 2.5e-30 136.7 242 37.2
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 3.2e-30 136.3 246 37.8
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 7.1e-30 135.2 247 36.0
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 7.1e-30 135.2 245 35.5
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.2e-29 134.4 245 35.1
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.1e-29 133.7 245 35.1
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.7e-29 133.3 249 38.2
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 7.9e-29 131.7 206 38.8
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.3e-28 131.0 231 37.2
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 1.8e-28 130.6 205 38.0
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 2.3e-28 130.2 197 39.6
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.1e-27 127.9 186 39.8
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 2.5e-27 126.7 203 36.9
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 3.3e-27 126.3 258 34.1
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 3.3e-27 126.3 203 37.4
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 4.3e-27 125.9 204 36.3
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 4.3e-27 125.9 210 38.1
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 1.3e-26 124.4 203 36.0
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 1.6e-26 124.0 209 34.0
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 2.8e-26 123.2 203 35.5
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 8.2e-26 121.7 198 37.4
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 1.1e-25 121.3 203 36.0
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 4.0e-25 119.4 202 35.1
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 4.0e-25 119.4 203 36.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 9.0e-25 118.2 202 35.1
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.7e-23 114.0 247 32.8
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 2.2e-23 113.6 202 37.1
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 3.8e-23 112.8 206 34.0
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.1e-22 111.3 248 34.3
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.9e-22 110.5 195 36.9
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 5.5e-22 109.0 138 42.0
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 5.5e-22 109.0 171 41.5
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 3.5e-21 106.3 137 40.9
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 4.6e-21 105.9 204 35.3
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 4.6e-21 105.9 204 35.3
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 7.9e-21 105.1 137 40.9
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.0e-20 104.8 237 35.4
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 3.0e-20 103.2 134 41.8
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 3.0e-20 103.2 267 31.1
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 5.1e-20 102.4 213 34.3
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.1e-19 101.3 126 43.7
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.3e-18 97.8 130 43.1
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.6e-18 97.4 158 36.1
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 2.8e-18 96.7 178 33.7
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 5.3e-17 92.4 178 36.5
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 1.2e-16 91.3 256 30.5
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.0e-16 90.5 101 48.5
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.7e-15 87.4 215 30.7
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 1.4e-14 84.3 126 40.5
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 3.0e-12 76.6 185 35.7
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 3.0e-12 76.6 130 36.9
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 8.8e-12 75.1 222 31.5
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 1.5e-11 74.3 135 37.0
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 2.2e-10 70.5 293 26.6
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 3.4e-08 63.2 103 33.0
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 5.9e-08 62.4 138 34.1
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 1.3e-07 61.2 154 31.8
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 6.5e-07 58.9 144 32.6
Duzib235G1124 Durio zibethinus HOM05D008587 ORTHO05D010485 6.5e-07 58.9 94 41.5
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 1.1e-06 58.2 176 29.0
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 1.1e-06 58.2 111 37.8
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 1.4e-06 57.8 147 34.7
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 1.4e-06 57.8 213 28.2
Aa31LG10G6860 Aethionema arabicum HOM05D008587 ORTHO05D010485 1.9e-06 57.4 111 36.9
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 1.9e-06 57.4 111 35.1
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 1.9e-06 57.4 117 29.9
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 5.5e-06 55.8 108 37.0
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 5.5e-06 55.8 144 29.9
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 5.5e-06 55.8 144 29.9
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 5.5e-06 55.8 144 29.9
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 7.2e-06 55.5 144 31.9


User provided reference genes

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