Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 2.8e-216 755.0 382 100.0
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.4e-162 576.6 336 85.7
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 2.7e-158 562.4 343 82.8
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.1e-156 557.0 343 81.3
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 8.8e-125 451.1 343 65.9
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 7.2e-119 431.4 345 62.3
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 9.4e-119 431.0 344 62.8
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 9.4e-119 431.0 343 62.1
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 2.0e-116 423.3 345 63.5
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 4.4e-116 422.2 344 62.8
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 2.2e-115 419.9 344 61.3
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 2.2e-115 419.9 344 64.0
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 2.8e-115 419.5 344 61.9
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 8.2e-115 417.9 345 61.7
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 1.2e-113 414.1 344 61.6
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 7.7e-113 411.4 345 61.2
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 2.9e-112 409.5 317 64.0
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 5.0e-112 408.7 348 60.3
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 1.9e-111 406.8 344 60.5
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.9e-111 406.8 344 57.8
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 2.5e-111 406.4 354 59.3
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 9.4e-111 404.4 346 59.2
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 8.0e-110 401.4 347 58.2
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 2.0e-108 396.7 347 58.2
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 5.7e-108 395.2 346 58.7
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 1.8e-106 390.2 355 55.5
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 1.8e-106 390.2 344 57.8
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.8e-106 390.2 347 57.9
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 3.1e-106 389.4 343 57.1
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 4.1e-106 389.0 348 56.6
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 7.0e-106 388.3 350 56.0
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 9.1e-106 387.9 349 58.2
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 9.1e-106 387.9 345 55.9
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 2.0e-105 386.7 346 57.2
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.6e-105 386.3 344 58.1
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 7.7e-105 384.8 344 57.8
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.0e-104 384.4 345 55.7
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.3e-104 384.0 347 58.5
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 1.7e-104 383.6 344 57.0
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 3.8e-104 382.5 348 57.5
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 6.5e-104 381.7 344 55.5
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 6.5e-104 381.7 345 57.7
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 8.5e-104 381.3 286 65.4
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 2.5e-103 379.8 344 57.0
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 7.2e-103 378.3 348 55.7
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 9.4e-103 377.9 351 55.6
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 2.7e-102 376.3 341 56.9
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 8.0e-102 374.8 345 54.8
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 8.0e-102 374.8 345 54.5
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.8e-101 373.6 344 55.2
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 1.8e-101 373.6 347 55.9
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 3.0e-101 372.9 345 55.1
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 3.0e-101 372.9 343 56.0
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 6.8e-101 371.7 345 53.9
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.8e-101 371.3 349 53.6
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 4.4e-100 369.0 345 54.5
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 5.7e-100 368.6 347 55.0
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.3e-99 367.5 343 54.8
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.7e-99 367.1 345 54.2
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.7e-99 367.1 345 54.2
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 3.7e-99 365.9 350 52.9
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 4.1e-98 362.5 320 59.1
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 7.7e-97 358.2 351 53.0
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.0e-96 357.8 287 60.6
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 2.2e-96 356.7 345 53.9
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 4.2e-95 352.4 363 50.4
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 7.2e-95 351.7 351 51.9
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 9.4e-95 351.3 349 51.0
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.6e-94 350.5 344 52.9
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 4.7e-94 349.0 349 51.0
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 8.8e-93 344.7 344 50.6
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 1.5e-92 344.0 346 50.3
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 3.4e-92 342.8 344 50.9
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 5.7e-92 342.0 348 50.6
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.8e-91 339.7 347 50.7
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 4.9e-91 339.0 317 53.3
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.4e-90 335.5 312 53.2
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 1.9e-87 327.0 352 51.7
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 4.2e-87 325.9 350 48.9
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.2e-86 324.3 347 51.0
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 2.1e-86 323.6 272 60.7
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.4e-85 320.9 296 55.1
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.5e-84 317.4 346 49.7
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 6.4e-83 312.0 344 51.5
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 1.5e-79 300.8 266 57.5
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.7e-75 287.3 363 44.4
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 7.0e-74 282.0 266 53.4
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 1.6e-73 280.8 374 41.7
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.6e-70 270.8 237 58.2
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 3.6e-70 269.6 354 41.8
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.1e-69 266.5 268 53.7
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.1e-61 241.5 246 49.6
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 3.1e-61 240.0 234 53.4
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 5.8e-60 235.7 245 50.2
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 1.7e-59 234.2 238 48.7
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 2.0e-52 210.7 229 48.9
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.6e-46 191.0 214 47.2
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 9.0e-45 185.3 167 52.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.3e-42 175.3 256 37.1
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.7e-41 173.7 340 32.4
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.4e-37 161.4 345 30.7
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 6.4e-35 152.5 199 41.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 3.0e-32 143.7 236 36.9
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 9.6e-31 138.7 99 71.7
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 3.9e-24 116.7 236 35.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 4.1e-21 106.7 132 41.7
MELO3C022571.2 Cucumis melo HOM05D016993 ORTHO05D019020 4.8e-14 83.2 58 72.4
MELO3C029988.2 Cucumis melo HOM05D007013 ORTHO05D029173 9.0e-13 79.0 58 69.0
MELO3C025412.2 Cucumis melo HOM05D007013 ORTHO05D029173 2.0e-12 77.8 57 68.4
MELO3C029511.2 Cucumis melo HOM05D007013 ORTHO05D029173 7.7e-12 75.9 53 73.6
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 1.7e-11 74.7 100 37.0
MELO3C029866.2 Cucumis melo HOM05D007013 ORTHO05D029173 5.0e-11 73.2 57 64.9
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.1e-07 62.0 47 59.6


User provided reference genes

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