Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 2.6e-135 485.3 237 100.0
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.3e-115 419.9 244 84.4
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 4.3e-114 414.8 245 82.9
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 2.4e-112 409.1 245 82.0
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-104 383.3 244 76.2
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.3e-104 381.3 245 78.4
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 9.0e-104 380.6 244 75.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.2e-103 380.2 244 76.2
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.6e-103 377.5 244 75.4
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 2.9e-102 375.6 244 75.4
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.8e-102 375.2 248 74.6
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.4e-102 374.0 244 75.0
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.1e-101 373.6 244 74.6
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.1e-101 373.6 244 75.0
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-101 373.2 248 74.2
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.9e-101 372.9 241 77.2
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 7.1e-101 370.9 241 76.3
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 2.7e-100 369.0 244 75.4
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.9e-100 367.5 246 73.6
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 7.9e-100 367.5 231 77.1
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 5.1e-99 364.8 242 74.8
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 6.7e-99 364.4 243 74.5
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.1e-98 363.6 242 73.6
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.1e-98 363.6 248 73.8
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 3.3e-98 362.1 246 72.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 6.3e-97 357.8 217 78.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.8e-96 356.3 220 78.6
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.8e-96 356.3 237 73.0
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 4.1e-96 355.1 244 72.1
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.1e-96 355.1 235 74.5
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.2e-95 353.6 235 75.3
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.5e-95 353.2 245 72.2
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.6e-95 352.4 240 70.8
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 2.6e-95 352.4 239 71.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 3.4e-95 352.1 239 73.6
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.5e-95 351.7 237 72.2
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 5.9e-95 351.3 229 74.2
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 7.7e-95 350.9 237 70.9
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.7e-95 350.9 237 71.3
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 7.7e-95 350.9 220 75.0
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.0e-94 350.5 242 71.9
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.9e-94 349.0 217 76.0
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.0e-94 348.2 217 77.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 8.5e-94 347.4 237 72.6
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.4e-93 346.7 241 71.0
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.9e-93 346.3 232 71.6
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.9e-93 346.3 237 70.0
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.9e-93 346.3 237 72.2
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.5e-93 345.9 240 72.1
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 2.5e-93 345.9 218 76.6
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.2e-93 345.5 247 69.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 7.2e-93 344.4 217 76.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.2e-92 343.6 247 69.2
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.2e-92 343.6 239 69.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 3.6e-92 342.0 217 75.6
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 3.6e-92 342.0 241 71.0
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 4.6e-92 341.7 243 69.5
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 4.6e-92 341.7 241 71.0
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 4.6e-92 341.7 238 69.7
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.1e-92 341.3 247 68.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 7.9e-92 340.9 239 70.3
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.0e-91 340.5 236 72.0
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.8e-91 339.7 304 61.2
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.8e-91 339.7 236 72.0
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 5.1e-91 338.2 236 72.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.3e-89 333.6 241 69.3
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.3e-89 333.6 228 72.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.2e-89 332.8 217 73.7
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.2e-89 332.8 227 73.6
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.8e-89 331.6 217 73.3
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 6.3e-89 331.3 227 71.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 8.2e-89 330.9 237 70.0
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.4e-88 329.3 233 70.4
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 3.1e-88 328.9 238 67.6
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 1.2e-87 327.0 232 69.4
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 3.4e-87 325.5 236 67.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 3.4e-87 325.5 239 68.6
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 7.7e-87 324.3 235 68.9
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 7.7e-87 324.3 236 68.2
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.0e-86 323.9 227 70.5
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.7e-86 323.2 221 71.0
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.7e-86 323.2 221 71.0
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.7e-86 323.2 221 71.0
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.7e-86 323.2 221 72.4
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.9e-86 322.4 211 73.5
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.8e-86 322.0 246 67.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 6.5e-86 321.2 195 77.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.9e-85 319.7 223 69.5
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.9e-85 319.7 223 69.5
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 3.2e-85 318.9 233 64.4
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 9.4e-85 317.4 199 76.9
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 9.4e-85 317.4 239 66.9
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 3.6e-84 315.5 195 77.4
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 7.9e-84 314.3 195 76.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.8e-83 313.2 223 69.1
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.4e-80 302.8 193 74.1
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 3.1e-80 302.4 217 65.0
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 5.9e-79 298.1 217 65.9
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 2.9e-78 295.8 232 63.4
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 7.2e-77 291.2 206 69.4
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 8.0e-76 287.7 199 70.9
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.0e-75 287.3 177 76.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.4e-75 287.0 234 63.2
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.1e-72 277.3 201 68.7
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 2.0e-71 273.1 194 66.0
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.1e-68 263.1 264 54.9
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 8.0e-68 261.2 188 66.5
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 2.0e-66 256.5 203 66.0
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 2.7e-63 246.1 218 56.4
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 7.7e-63 244.6 220 53.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.5e-61 238.4 144 76.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.7e-57 225.7 203 55.2
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.2e-55 220.7 237 49.4
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.6e-55 220.3 177 61.6
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.0e-55 219.9 195 58.5
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 5.0e-54 215.3 141 74.5
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.9e-49 198.7 128 75.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.9e-32 143.7 184 44.0
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 6.2e-28 128.6 208 38.9
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.3e-25 120.9 91 69.2
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.1e-23 113.6 251 31.9
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 4.7e-20 102.4 167 37.1
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 7.8e-15 85.1 62 61.3
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.7e-14 84.0 47 78.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.5e-13 80.9 48 75.0
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 1.2e-07 61.2 177 32.2
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 6.0e-07 58.9 34 70.6


User provided reference genes

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