Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 3.4e-98 362.1 246 100.0
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.0e-81 307.4 171 88.3
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 2.1e-79 299.7 165 89.1
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 6.1e-79 298.1 161 90.7
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.9e-68 261.9 172 78.5
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.2e-66 257.3 172 75.6
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.7e-65 253.4 148 85.1
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.7e-65 253.4 151 80.8
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 3.8e-65 252.3 149 84.6
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.1e-64 250.8 147 84.4
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 3.3e-64 249.2 173 72.8
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 3.3e-64 249.2 172 72.7
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 3.3e-64 249.2 172 72.7
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 3.3e-64 249.2 172 71.5
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 4.3e-64 248.8 151 79.5
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 7.3e-64 248.1 172 73.3
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 9.5e-64 247.7 172 71.5
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.2e-63 247.3 172 72.7
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 1.2e-63 247.3 172 72.7
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 2.1e-63 246.5 149 79.9
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 2.8e-63 246.1 172 72.1
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.8e-63 246.1 152 78.9
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 2.8e-63 246.1 159 76.7
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 4.7e-63 245.4 172 72.7
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 6.1e-63 245.0 172 73.8
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 6.1e-63 245.0 174 70.1
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 8.0e-63 244.6 172 71.5
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 8.0e-63 244.6 172 72.1
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 8.0e-63 244.6 172 70.9
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.0e-62 244.2 174 73.6
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.8e-62 243.4 172 70.3
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.8e-62 243.4 150 78.7
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 2.3e-62 243.0 161 75.2
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 2.3e-62 243.0 174 71.8
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.3e-62 243.0 150 79.3
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.0e-62 242.7 172 71.5
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 3.0e-62 242.7 172 69.8
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 4.0e-62 242.3 146 79.5
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 4.0e-62 242.3 172 70.3
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 8.9e-62 241.1 167 72.5
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 1.2e-61 240.7 162 74.1
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 1.5e-61 240.4 168 71.4
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.5e-61 240.4 149 78.5
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 3.4e-61 239.2 163 73.0
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 3.4e-61 239.2 146 79.5
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 5.7e-61 238.4 144 81.2
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 5.7e-61 238.4 174 72.4
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.3e-60 237.3 173 71.1
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.7e-60 236.9 175 69.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 1.7e-60 236.9 175 68.6
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 2.9e-60 236.1 172 69.2
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 4.9e-60 235.3 151 74.2
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 4.9e-60 235.3 151 74.2
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 4.9e-60 235.3 151 75.5
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 4.9e-60 235.3 178 66.9
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 4.9e-60 235.3 169 71.0
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 8.3e-60 234.6 151 75.5
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.1e-59 234.2 134 82.1
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 1.4e-59 233.8 145 80.7
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 1.8e-59 233.4 172 69.2
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 2.4e-59 233.0 150 75.3
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 2.4e-59 233.0 145 78.6
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 2.4e-59 233.0 167 70.1
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 2.4e-59 233.0 147 76.2
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 3.2e-59 232.6 175 66.3
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 4.1e-59 232.3 155 73.5
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 4.1e-59 232.3 173 67.1
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 5.4e-59 231.9 177 69.5
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 7.0e-59 231.5 150 75.3
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 9.2e-59 231.1 153 76.5
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.6e-58 230.3 167 68.3
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.6e-58 230.3 167 68.3
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 3.5e-58 229.2 151 74.8
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 5.9e-58 228.4 145 77.2
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 5.9e-58 228.4 145 77.2
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 5.9e-58 228.4 145 77.2
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 1.0e-57 227.6 150 74.0
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 1.7e-57 226.9 134 82.1
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 8.6e-57 224.6 147 74.1
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.1e-56 224.2 172 67.4
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.1e-56 224.2 146 75.3
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.5e-56 223.8 136 80.1
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.5e-56 223.8 133 81.2
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 1.9e-56 223.4 132 82.6
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.0e-54 217.6 151 73.5
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 4.0e-54 215.7 237 52.3
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.2e-52 209.9 156 67.9
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 3.7e-52 209.1 144 68.8
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 4.6e-50 202.2 145 73.1
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.2e-44 183.3 131 68.7
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.9e-43 180.3 133 64.7
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 3.2e-43 179.5 145 62.8
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 7.8e-42 174.9 135 60.0
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 8.6e-41 171.4 128 73.4
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 1.6e-39 167.2 145 60.7
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.3e-36 157.5 89 82.0
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 3.9e-33 146.0 173 50.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 8.6e-33 144.8 169 52.7
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 3.3e-32 142.9 105 72.4
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 5.6e-32 142.1 102 74.5
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 2.8e-31 139.8 131 56.5
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 1.7e-28 130.6 147 46.9
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.4e-27 127.5 110 61.8
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.4e-27 127.5 110 61.8
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.6e-21 106.7 88 63.6
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 6.4e-20 102.1 83 68.7
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.9e-19 100.5 73 74.0
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 7.9e-18 95.1 57 78.9
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 1.0e-17 94.7 108 45.4
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 9.0e-14 81.6 80 55.0
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 7.9e-10 68.6 120 45.0
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 1.1e-08 64.7 31 80.6
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.1e-08 64.7 37 83.8
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 7.4e-08 62.0 31 77.4
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 4.0e-06 56.2 94 39.4


User provided reference genes

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