Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 1.3e-74 283.1 156 100.0
Sed0025236 Sechium edule HOM05D008806 ORTHO05D003654 5.7e-38 161.4 167 62.9
MELO3C028684.2 Cucumis melo HOM05D008806 ORTHO05D003654 2.9e-34 149.1 177 58.8
ClCG02G002830 Citrullus lanatus HOM05D008806 ORTHO05D003654 1.1e-33 147.1 171 58.5
Manes.12G064700 Manihot esculenta HOM05D008806 ORTHO05D003654 2.5e-17 92.8 160 45.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.8e-15 86.7 164 40.9
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 5.7e-14 81.6 168 41.1
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 5.7e-14 81.6 168 41.1
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 7.4e-14 81.3 182 36.3
Gohir.A07G191701 Gossypium hirsutum HOM05D008806 ORTHO05D003654 4.8e-13 78.6 169 39.1
Manes.13G062200 Manihot esculenta HOM05D008806 ORTHO05D003654 4.8e-13 78.6 160 38.1
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 1.1e-12 77.4 182 40.7
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 1.1e-12 77.4 173 34.7
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 3.1e-12 75.9 188 36.2
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 4.1e-12 75.5 143 39.2
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 4.1e-12 75.5 162 38.3
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 5.3e-12 75.1 186 34.9
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 5.3e-12 75.1 172 38.4
Gohir.D07G197900 Gossypium hirsutum HOM05D008806 ORTHO05D003654 5.3e-12 75.1 171 36.8
Sabra14G0126900 Salix brachista HOM05D008806 ORTHO05D003654 5.3e-12 75.1 159 38.4
Gorai.001G221500 Gossypium raimondii HOM05D008806 ORTHO05D003654 7.0e-12 74.7 166 39.8
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 9.1e-12 74.3 201 33.3
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 9.1e-12 74.3 178 37.6
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.6e-11 72.8 193 35.2
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 3.5e-11 72.4 181 39.2
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 3.5e-11 72.4 170 35.3
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 4.5e-11 72.0 171 37.4
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.3e-10 70.5 143 39.2
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 1.7e-10 70.1 172 36.0
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 2.2e-10 69.7 188 32.4
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 3.8e-10 68.9 194 35.1
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 3.8e-10 68.9 214 32.7
Dinv26612 Davidia involucrata HOM05D008806 ORTHO05D003654 4.2e-09 65.5 138 35.5
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 5.5e-09 65.1 192 32.8
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 7.2e-09 64.7 179 32.4
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 9.4e-09 64.3 203 29.6
FAN14G2730 Fragaria x ananassa HOM05D008806 ORTHO05D003654 2.1e-08 63.2 149 33.6
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.7e-08 62.8 201 29.4
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.7e-08 62.0 191 30.9
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 2.3e-07 59.7 224 32.6
TWI36G1583 Tripterygium wilfordii HOM05D008806 ORTHO05D003654 2.3e-07 59.7 174 35.1
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 3.0e-07 59.3 209 29.2
COL.COLO4_33339 Corchorus olitorius HOM05D008806 ORTHO05D003654 4.0e-07 58.9 136 36.0
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 4.0e-07 58.9 194 29.4
Sp3g23290 Schrenkiella parvula HOM05D011557 ORTHO05D013745 8.8e-07 57.8 171 34.5
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 1.2e-06 57.4 190 33.2
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 1.2e-06 57.4 175 32.6
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 1.5e-06 57.0 234 29.1
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 3.3e-06 55.8 222 30.2
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 4.4e-06 55.5 180 33.3
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 7.5e-06 54.7 220 30.5
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 9.7e-06 54.3 178 33.7
Phvul.008G289200 Phaseolus vulgaris HOM05D014380 ORTHO05D017040 9.7e-06 54.3 154 33.1


User provided reference genes

Program Settings