Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 1.2e-101 373.2 196 100.0
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 3.3e-67 258.8 198 73.7
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 3.2e-62 242.3 196 67.9
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 3.9e-60 235.3 197 67.5
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.7e-39 166.8 208 55.3
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 4.2e-38 162.2 199 54.8
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 2.7e-37 159.5 195 51.3
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 5.1e-36 155.2 198 52.0
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 5.1e-36 155.2 200 47.0
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 5.1e-36 155.2 196 47.4
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 1.5e-35 153.7 201 50.7
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 2.5e-35 152.9 187 48.1
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 3.3e-35 152.5 198 48.0
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 7.4e-35 151.4 194 53.1
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 1.3e-34 150.6 204 51.5
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 3.7e-34 149.1 205 50.7
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 2.4e-33 146.4 204 50.5
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 4.0e-33 145.6 193 49.2
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 4.0e-33 145.6 194 49.5
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 1.5e-32 143.7 195 47.7
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.6e-32 142.9 188 52.7
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 7.6e-32 141.4 191 47.6
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 3.8e-31 139.0 184 48.9
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 3.8e-31 139.0 195 44.1
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 4.9e-31 138.7 188 51.1
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.1e-30 137.5 186 51.6
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 5.5e-30 135.2 211 49.8
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 2.1e-29 133.3 202 48.5
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 2.1e-29 133.3 202 48.5
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 2.7e-29 132.9 186 50.5
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 4.6e-29 132.1 202 49.5
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 1.0e-28 131.0 199 47.2
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 3.0e-28 129.4 198 48.0
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.1e-28 128.6 144 52.1
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.1e-28 128.6 144 52.1
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 2.5e-22 109.8 131 51.1
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 3.2e-22 109.4 160 44.4
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.3e-18 97.4 132 52.3
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 1.6e-18 97.1 230 37.8
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 3.1e-17 92.8 174 40.2
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 5.0e-15 85.5 110 53.6
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 6.1e-13 78.6 158 36.7
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 6.9e-09 65.1 94 41.5


User provided reference genes

Program Settings