Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022919 Sechium edule HOM05D001797 ORTHO05D001650 1.1e-122 443.4 231 100.0
MELO3C008011.2 Cucumis melo HOM05D001797 ORTHO05D001650 1.0e-19 101.3 212 41.0
CsaV3_6G048280 Cucumis sativus L. HOM05D001797 ORTHO05D001650 3.0e-19 99.8 221 38.9
Sed0015976 Sechium edule HOM05D001797 ORTHO05D001650 8.7e-19 98.2 189 36.0
ClCG01G021270 Citrullus lanatus HOM05D001797 ORTHO05D001650 1.8e-11 73.9 229 33.2
Sed0004833 Sechium edule HOM05D001797 ORTHO05D001650 6.7e-11 72.0 196 33.2
Sed0010187 Sechium edule HOM05D001797 ORTHO05D001650 3.3e-10 69.7 156 30.8
MD08G1234400 Malus domestica HOM05D001797 ORTHO05D001650 6.9e-08 62.0 65 46.2
FvH4_3g00441 Fragaria vesca HOM05D001797 ORTHO05D001650 9.0e-08 61.6 67 44.8
MD10G1337500 Malus domestica HOM05D001797 ORTHO05D001650 9.0e-08 61.6 61 47.5
RcHm_v2.0_Chr1g0347351 Rosa chinensis HOM05D001797 ORTHO05D001650 9.0e-08 61.6 158 28.5
Aa31LG2G12440 Aethionema arabicum HOM05D001797 ORTHO05D001650 1.5e-07 60.8 61 49.2
MD05G1360500 Malus domestica HOM05D001797 ORTHO05D001650 2.6e-07 60.1 61 47.5
Atru.chr1.2286 Acer truncatum HOM05D001797 ORTHO05D001650 3.4e-07 59.7 58 48.3
Ciclev10016401m.g Citrus clementina HOM05D001797 ORTHO05D001650 3.4e-07 59.7 62 48.4
MELO3C026077.2 Cucumis melo HOM05D001797 ORTHO05D001650 3.4e-07 59.7 64 45.3
CsaV3_1G015440 Cucumis sativus L. HOM05D001797 ORTHO05D001650 3.4e-07 59.7 64 45.3
FvH4_3g00443 Fragaria vesca HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FvH4_3g00445 Fragaria vesca HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN02G3978 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN03G0520 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN05G0358 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN05G0669 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN05G4551 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN06G3990 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN08G2964 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN15G3701 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN16G3637 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN24G0943 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN26G1410 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN27G0715 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN27G3366 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
FAN28G0889 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
THA.LOC104815475 Tarenaya hassleriana HOM05D001797 ORTHO05D001650 3.4e-07 59.7 61 47.5
MD10G1337900 Malus domestica HOM05D001797 ORTHO05D001650 4.5e-07 59.3 62 45.2
GSVIVG01003495001 Vitis vinifera HOM05D001797 ORTHO05D001650 4.5e-07 59.3 153 29.4
ECA247G2176 Erigeron canadensis HOM05D001797 ORTHO05D001650 5.9e-07 58.9 65 44.6
Prupe.4G004900 Prunus persica HOM05D001797 ORTHO05D001650 5.9e-07 58.9 58 46.6
Actinidia35737 Actinidia chinensis HOM05D001797 ORTHO05D001650 7.7e-07 58.5 65 44.6
ClCG01G011010 Citrullus lanatus HOM05D001797 ORTHO05D001650 7.7e-07 58.5 61 45.9
FvH4_3g00430 Fragaria vesca HOM05D001797 ORTHO05D001650 7.7e-07 58.5 61 45.9
Dinv15353 Davidia involucrata HOM05D001797 ORTHO05D001650 1.0e-06 58.2 66 42.4
Psat4g002360 Pisum sativum HOM05D001797 ORTHO05D001650 1.0e-06 58.2 58 48.3
RcHm_v2.0_Chr5g0000621 Rosa chinensis HOM05D001797 ORTHO05D001650 1.0e-06 58.2 61 44.3
BcaNung00203 Brassica carinata HOM05D001797 ORTHO05D001650 1.3e-06 57.8 62 46.8
Dinv15346 Davidia involucrata HOM05D001797 ORTHO05D001650 1.3e-06 57.8 65 43.1
TWI63G0580 Tripterygium wilfordii HOM05D001797 ORTHO05D001650 1.3e-06 57.8 65 41.5
Ah.14g087420 Amaranthus hybridus HOM05D001797 ORTHO05D001650 1.7e-06 57.4 65 43.1
Duzib192G0521 Durio zibethinus HOM05D001797 ORTHO05D001650 1.7e-06 57.4 65 44.6
FAN14G5464 Fragaria x ananassa HOM05D001797 ORTHO05D001650 1.7e-06 57.4 63 46.0
FAN21G3005 Fragaria x ananassa HOM05D001797 ORTHO05D001650 1.7e-06 57.4 63 46.0
FAN25G0318 Fragaria x ananassa HOM05D001797 ORTHO05D001650 1.7e-06 57.4 63 46.0
Gohir.D06G162900 Gossypium hirsutum HOM05D001797 ORTHO05D001650 1.7e-06 57.4 61 44.3
TWI38G0564 Tripterygium wilfordii HOM05D001797 ORTHO05D001650 1.7e-06 57.4 61 44.3
Actinidia01445 Actinidia chinensis HOM05D001797 ORTHO05D001650 2.2e-06 57.0 65 44.6
MSTRG.16049 Avicennia marina HOM05D001797 ORTHO05D001650 2.2e-06 57.0 67 44.8
C07p47830 Brassica napus HOM05D001797 ORTHO05D001650 2.2e-06 57.0 61 47.5
BolC7t45305H Brassica oleracea HOM05D001797 ORTHO05D001650 2.2e-06 57.0 61 47.5
CSS0000720 Camellia sinensis var. sinensis HOM05D001797 ORTHO05D001650 2.2e-06 57.0 65 41.5
CSS0035696 Camellia sinensis var. sinensis HOM05D001797 ORTHO05D001650 2.2e-06 57.0 65 41.5
Ciclev10017543m.g Citrus clementina HOM05D001797 ORTHO05D001650 2.2e-06 57.0 65 46.2
Gohir.A06G156500 Gossypium hirsutum HOM05D001797 ORTHO05D001650 2.2e-06 57.0 61 44.3
Gorai.010G190100 Gossypium raimondii HOM05D001797 ORTHO05D001650 2.2e-06 57.0 61 44.3
MD10G1338100 Malus domestica HOM05D001797 ORTHO05D001650 2.2e-06 57.0 63 46.0
Cc09_g08340 Coffea canephora HOM05D001797 ORTHO05D001650 2.9e-06 56.6 62 45.2
FAN25G2435 Fragaria x ananassa HOM05D001797 ORTHO05D001650 2.9e-06 56.6 66 43.9
RcHm_v2.0_Chr1g0347291 Rosa chinensis HOM05D001797 ORTHO05D001650 2.9e-06 56.6 58 44.8
CARHR222750 Cardamine hirsuta HOM05D001797 ORTHO05D001650 3.8e-06 56.2 61 47.5
FAN08G1118 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.8e-06 56.2 66 45.5
FAN13G2605 Fragaria x ananassa HOM05D001797 ORTHO05D001650 3.8e-06 56.2 66 45.5
RcHm_v2.0_Chr1g0328811 Rosa chinensis HOM05D001797 ORTHO05D001650 3.8e-06 56.2 61 44.3
AL7G38650 Arabidopsis lyrata HOM05D001797 ORTHO05D001650 5.0e-06 55.8 61 45.9
A08p12240 Brassica napus HOM05D001797 ORTHO05D001650 5.0e-06 55.8 61 45.9
BolC8t48363H Brassica oleracea HOM05D001797 ORTHO05D001650 5.0e-06 55.8 61 45.9
BraA08t33234Z Brassica rapa HOM05D001797 ORTHO05D001650 5.0e-06 55.8 61 45.9
Lsat_1_v5_gn_7_13200 Lactuca sativa HOM05D001797 ORTHO05D001650 5.0e-06 55.8 65 44.6
SGA_v2.0_scaffold89G27532 Striga asiatica HOM05D001797 ORTHO05D001650 5.0e-06 55.8 65 44.6
Aa31LG8G14970 Aethionema arabicum HOM05D001797 ORTHO05D001650 6.5e-06 55.5 61 45.9
AT4G16380 Arabidopsis thaliana HOM05D001797 ORTHO05D001650 6.5e-06 55.5 61 45.9
CSS0024411 Camellia sinensis var. sinensis HOM05D001797 ORTHO05D001650 6.5e-06 55.5 62 41.9
Cc03_g07690 Coffea canephora HOM05D001797 ORTHO05D001650 6.5e-06 55.5 65 43.1
DCAR_002238 Daucus carota HOM05D001797 ORTHO05D001650 6.5e-06 55.5 66 43.9
Duzib235G0111 Durio zibethinus HOM05D001797 ORTHO05D001650 6.5e-06 55.5 58 46.6
Lj4g0001433 Lotus japonicus HOM05D001797 ORTHO05D001650 6.5e-06 55.5 61 44.3
Sed0007136 Sechium edule HOM05D001797 ORTHO05D001650 6.5e-06 55.5 61 45.9
CANSAT56G0532 Cannabis sativa HOM05D001797 ORTHO05D001650 8.5e-06 55.1 60 43.3
CAN.G449.28 Capsicum annuum HOM05D001797 ORTHO05D001650 8.5e-06 55.1 58 46.6
Lj6g0019164 Lotus japonicus HOM05D001797 ORTHO05D001650 8.5e-06 55.1 61 44.3
MD10G1337700 Malus domestica HOM05D001797 ORTHO05D001650 8.5e-06 55.1 65 44.6
Oeu052841.1 Olea europaea HOM05D001797 ORTHO05D001650 8.5e-06 55.1 128 28.9
Solyc11g012680.3 Solanum lycopersicum HOM05D001797 ORTHO05D001650 8.5e-06 55.1 64 40.6
Sopen11g007410 Solanum pennellii HOM05D001797 ORTHO05D001650 8.5e-06 55.1 64 40.6
SGA_v2.0_scaffold7G03707 Striga asiatica HOM05D001797 ORTHO05D001650 8.5e-06 55.1 64 45.3
TWI38G0899 Tripterygium wilfordii HOM05D001797 ORTHO05D001650 8.5e-06 55.1 61 45.9


User provided reference genes

Program Settings