Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 5.0e-179 630.9 310 100.0
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.1e-141 506.9 276 87.7
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.7e-140 502.3 276 87.0
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.8e-136 489.6 272 86.0
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.8e-136 489.6 276 84.1
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 5.2e-136 488.0 289 83.0
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.5e-135 486.5 276 82.6
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 9.9e-135 483.8 275 83.6
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.2e-134 482.6 273 83.5
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.9e-134 482.3 274 83.9
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 4.9e-134 481.5 267 85.8
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 6.4e-134 481.1 277 84.1
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.1e-133 480.3 271 83.8
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.1e-133 480.3 272 84.2
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.4e-133 479.9 276 82.2
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.4e-133 479.9 273 82.4
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.9e-133 479.6 275 82.5
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.4e-133 479.2 271 83.4
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.2e-133 478.8 272 83.5
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 7.1e-133 477.6 271 83.4
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 9.3e-133 477.2 267 85.0
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-132 476.9 273 83.2
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 1.6e-132 476.5 267 85.0
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.6e-132 476.5 276 82.2
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.1e-132 476.1 268 83.6
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 4.6e-132 474.9 272 83.1
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 7.8e-132 474.2 274 81.4
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 2.3e-131 472.6 274 83.2
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 3.0e-131 472.2 267 84.6
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 3.0e-131 472.2 272 82.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 3.9e-131 471.9 267 85.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 6.6e-131 471.1 268 81.7
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.5e-130 469.9 267 83.5
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.5e-130 469.9 267 84.3
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.5e-130 469.9 272 82.4
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.5e-130 469.9 272 82.7
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.9e-130 469.5 267 83.1
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 1.9e-130 469.5 267 83.9
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.5e-130 469.2 268 82.5
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 4.3e-130 468.4 266 82.7
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 9.6e-130 467.2 268 82.8
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.3e-129 466.8 276 81.2
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.6e-129 466.5 267 82.0
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 6.2e-129 464.5 278 80.9
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 1.4e-128 463.4 267 81.6
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 3.1e-128 462.2 267 83.5
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 4.0e-128 461.8 267 80.9
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 9.0e-128 460.7 264 83.0
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 1.2e-127 460.3 267 80.5
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.0e-127 459.5 273 80.2
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.0e-127 459.5 267 80.1
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.6e-127 459.1 271 81.2
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 5.8e-127 458.0 267 81.6
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 7.6e-127 457.6 267 79.8
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.3e-126 456.8 270 78.5
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 2.2e-126 456.1 301 74.1
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 6.4e-126 454.5 266 78.9
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 6.4e-126 454.5 267 79.8
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 8.4e-126 454.1 267 79.0
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 1.1e-125 453.8 268 79.1
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 1.4e-125 453.4 273 78.0
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.4e-125 452.6 271 78.6
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 3.2e-125 452.2 278 79.1
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.2e-125 452.2 267 79.8
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.2e-125 451.8 258 81.0
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 7.1e-125 451.1 268 80.6
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.6e-124 449.9 267 79.0
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.7e-124 449.1 276 77.5
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 3.5e-124 448.7 258 80.6
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 4.6e-124 448.4 267 78.7
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.0e-123 447.2 266 78.6
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.3e-123 446.8 271 78.6
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 1.8e-123 446.4 274 76.6
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 5.1e-123 444.9 292 73.3
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.5e-122 443.4 267 77.9
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.9e-122 443.0 266 77.8
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 5.6e-122 441.4 289 72.3
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 9.6e-122 440.7 308 69.8
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.1e-121 439.5 270 78.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 3.7e-121 438.7 273 77.7
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 6.2e-121 438.0 270 78.1
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.2e-119 433.7 262 78.2
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.9e-117 426.4 268 75.4
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 4.6e-116 421.8 261 76.6
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 1.5e-111 406.8 288 70.1
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 7.6e-111 404.4 268 72.8
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 6.0e-108 394.8 231 80.1
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 6.7e-107 391.3 205 90.2
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 5.7e-106 388.3 270 68.1
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 3.1e-104 382.5 208 86.5
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.5e-103 380.2 227 78.0
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 5.9e-103 378.3 271 68.6
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.5e-101 372.9 296 63.2
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 9.3e-101 370.9 271 66.8
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.1e-100 369.8 281 65.1
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 8.2e-97 357.8 189 89.4
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 3.4e-95 352.4 189 87.8
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 8.5e-86 321.2 212 73.6
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 5.0e-78 295.4 184 77.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.2e-74 284.3 145 91.0
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.2e-70 270.0 134 92.5
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 5.0e-46 189.1 127 71.7
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 7.3e-45 185.3 106 78.3
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 7.3e-45 185.3 130 68.5
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.6e-44 184.1 119 73.9
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.9e-41 173.3 123 69.1
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 4.9e-41 172.6 116 73.3
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.4e-41 172.2 122 68.9
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.4e-41 172.2 122 68.9
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.0e-38 163.3 123 66.7
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 4.7e-28 129.4 114 57.0
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.7e-17 94.4 71 62.0
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 9.6e-13 78.6 54 68.5
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.6e-12 77.8 54 66.7
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 6.2e-12 75.9 54 66.7
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 5.3e-11 72.8 54 64.8
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 9.0e-11 72.0 254 26.8
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 3.8e-09 66.6 42 71.4
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 3.5e-07 60.1 63 47.6
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 4.6e-07 59.7 291 25.4


User provided reference genes

Program Settings