Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 2.4e-49 198.7 118 100.0
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.8e-28 129.4 113 74.3
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 6.9e-28 127.5 115 73.0
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 4.4e-27 124.8 115 71.3
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 1.9e-22 109.4 118 56.8
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 1.0e-15 87.0 100 55.0
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.0e-15 87.0 69 76.8
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 1.0e-15 87.0 69 78.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.3e-15 86.7 93 64.5
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 8.7e-15 84.0 69 66.7
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 8.7e-15 84.0 69 76.8
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 3.3e-14 82.0 105 48.6
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 3.3e-14 82.0 86 57.0
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 4.3e-14 81.6 89 57.3
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 5.6e-14 81.3 69 63.8
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 5.6e-14 81.3 69 63.8
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 9.6e-14 80.5 74 73.0
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 1.3e-13 80.1 69 60.9
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.6e-13 79.7 69 66.7
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 2.1e-13 79.3 99 53.5
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 4.8e-13 78.2 86 55.8
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 4.8e-13 78.2 86 55.8
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 6.2e-13 77.8 92 52.2
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.4e-12 76.6 126 50.8
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 1.4e-12 76.6 66 69.7
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 1.4e-12 76.6 71 70.4
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.8e-12 76.3 93 50.5
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 2.4e-12 75.9 127 41.7
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 3.1e-12 75.5 69 60.9
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 3.1e-12 75.5 75 58.7
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 4.0e-12 75.1 83 50.6
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 4.0e-12 75.1 76 53.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 9.0e-12 73.9 88 61.4
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.5e-11 73.2 59 66.1
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.5e-11 73.2 59 67.8
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 2.0e-11 72.8 69 65.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 3.4e-11 72.0 85 50.6
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 3.4e-11 72.0 69 58.0
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 4.5e-11 71.6 59 71.2
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 4.5e-11 71.6 85 56.5
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 4.5e-11 71.6 95 49.5
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 5.8e-11 71.2 62 74.2
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 7.6e-11 70.9 69 59.4
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 7.6e-11 70.9 118 43.2
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 7.6e-11 70.9 69 68.1
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 9.9e-11 70.5 87 50.6
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.2e-10 69.3 63 61.9
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 3.8e-10 68.6 60 60.0
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 6.4e-10 67.8 71 50.7
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 6.4e-10 67.8 69 65.2
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 8.4e-10 67.4 100 45.0
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 8.4e-10 67.4 69 53.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.9e-09 66.2 60 56.7
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 2.4e-09 65.9 60 71.7
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 5.5e-09 64.7 118 40.7
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 5.5e-09 64.7 71 49.3
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 9.3e-09 63.9 105 44.8
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 1.2e-08 63.5 69 59.4
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 4.6e-08 61.6 60 51.7
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 4.6e-08 61.6 60 51.7
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 7.9e-08 60.8 85 56.5
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 2.3e-07 59.3 40 75.0
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 5.1e-07 58.2 56 60.7
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.5e-06 56.6 114 36.8


User provided reference genes

Program Settings