Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 3.6e-191 671.4 330 100.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.3e-148 530.0 329 78.4
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 2.9e-148 528.9 329 79.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 2.9e-148 528.9 328 79.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 3.2e-115 419.1 327 63.6
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 5.4e-115 418.3 327 63.3
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 2.1e-114 416.4 328 62.2
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 4.6e-114 415.2 327 63.0
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.7e-113 413.3 342 60.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.9e-112 409.8 326 61.3
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 7.3e-112 407.9 328 61.6
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.3e-111 407.1 328 61.6
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 4.8e-111 405.2 326 62.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 4.0e-110 402.1 329 61.7
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.6e-109 399.4 326 59.8
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.6e-109 399.4 326 59.8
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 5.8e-109 398.3 326 59.2
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.7e-108 396.7 326 59.5
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.9e-108 396.0 326 59.2
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 2.9e-108 396.0 328 60.7
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.1e-107 394.0 325 59.4
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.4e-107 392.9 327 61.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.2e-107 392.5 327 61.8
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.1e-106 389.8 326 59.5
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 4.6e-106 388.7 326 61.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.0e-105 387.5 326 60.4
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.8e-105 386.7 339 58.7
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.3e-105 386.3 326 58.6
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.0e-105 386.0 333 58.3
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.5e-104 383.6 326 58.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.5e-104 383.6 327 59.9
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 9.6e-104 380.9 328 59.5
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 2.1e-103 379.8 327 55.7
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.8e-103 378.6 335 59.4
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 4.8e-103 378.6 327 56.9
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.2e-103 378.3 335 59.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 6.2e-103 378.3 330 57.3
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.4e-102 376.3 328 57.9
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 3.1e-102 375.9 329 57.8
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 3.1e-102 375.9 327 56.3
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 5.3e-102 375.2 330 57.9
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 5.3e-102 375.2 327 55.4
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.2e-101 374.0 330 54.8
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.6e-101 372.9 326 59.5
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.0e-100 370.9 328 57.6
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.0e-100 370.9 326 55.8
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.3e-100 370.5 327 56.6
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.7e-100 370.2 331 55.6
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.9e-100 369.4 327 54.1
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 8.4e-100 367.9 328 56.7
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 2.5e-99 366.3 327 55.0
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.2e-99 365.5 350 53.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 4.2e-99 365.5 318 57.5
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 9.3e-99 364.4 335 57.6
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.2e-98 364.0 328 55.5
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.0e-97 360.9 328 55.5
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.3e-97 360.5 327 54.7
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 6.7e-97 358.2 327 56.6
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 8.7e-97 357.8 300 59.3
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 8.7e-97 357.8 326 54.3
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.1e-96 357.5 324 55.9
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 3.3e-96 355.9 332 54.5
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 4.3e-96 355.5 326 53.7
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 3.7e-95 352.4 327 52.9
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 4.8e-95 352.1 327 54.7
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.4e-94 349.7 332 52.7
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.4e-94 349.7 329 53.5
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 3.1e-94 349.4 328 54.6
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 9.0e-94 347.8 337 53.1
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.0e-93 346.7 307 59.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 3.8e-92 342.4 330 52.4
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.1e-90 336.7 267 61.8
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 2.7e-90 336.3 293 57.3
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 6.1e-90 335.1 326 54.0
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 7.9e-90 334.7 327 53.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 7.9e-90 334.7 338 51.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.3e-89 333.2 327 52.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 3.9e-89 332.4 328 51.8
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 5.1e-89 332.0 289 58.8
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.5e-88 330.5 324 53.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 5.7e-88 328.6 329 52.3
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 5.7e-88 328.6 329 52.3
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 4.8e-87 325.5 328 52.4
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 1.1e-86 324.3 327 51.1
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.4e-86 323.9 329 51.7
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 1.4e-86 323.9 335 52.2
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.2e-85 320.9 376 47.1
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 2.6e-85 319.7 327 50.8
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 7.7e-85 318.2 297 53.9
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.2e-84 316.6 328 50.6
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.3e-79 300.8 330 47.0
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 8.2e-79 298.1 330 51.8
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.1e-78 297.7 333 48.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.5e-75 286.6 332 47.0
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.0e-73 281.2 342 44.7
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.4e-73 280.8 330 45.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 8.8e-73 278.1 263 52.5
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 3.3e-72 276.2 327 47.4
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 3.1e-70 269.6 266 53.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.2e-69 267.7 347 43.5
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.9e-67 260.4 330 42.7
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.0e-61 240.4 384 38.3
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.2e-58 231.1 194 58.2
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 6.1e-58 228.8 381 38.3
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 5.4e-54 215.7 180 61.7
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.3e-47 194.5 134 67.9
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.6e-42 176.4 133 63.9
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.0e-41 172.9 168 52.4
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 9.2e-38 161.8 327 33.3
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.3e-35 152.9 135 54.1
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.2e-34 151.4 98 68.4
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.7e-34 149.4 221 43.4
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.3e-31 141.4 116 58.6
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 1.0e-28 131.7 113 59.3
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 5.6e-27 125.9 87 69.0
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 3.4e-24 116.7 134 46.3
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.4e-22 111.3 106 49.1
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 6.6e-20 102.4 138 44.9
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.9e-17 92.0 73 63.0
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.3e-15 88.2 316 24.1
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.4e-14 84.0 69 58.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 7.1e-14 82.4 271 26.6
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 6.2e-10 69.3 50 60.0
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.5e-08 64.7 103 38.8


User provided reference genes

Program Settings