Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022748 Sechium edule HOM05D001463 ORTHO05D001282 5.5e-87 324.3 169 100.0
Sed0003709 Sechium edule HOM05D001463 ORTHO05D001282 4.1e-50 201.8 135 77.8
ClCG07G003740 Citrullus lanatus HOM05D001463 ORTHO05D001282 6.1e-46 188.0 139 71.9
CsaV3_5G008550 Cucumis sativus L. HOM05D001463 ORTHO05D001282 4.0e-45 185.3 139 71.9
MELO3C026564.2 Cucumis melo HOM05D001463 ORTHO05D001282 7.5e-44 181.0 135 71.1
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 2.9e-27 125.9 141 55.3
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.7e-24 116.7 141 51.8
Sabra08G0045300 Salix brachista HOM05D001463 ORTHO05D001282 6.6e-24 114.8 162 46.3
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.9e-23 113.2 142 52.1
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 3.3e-23 112.5 147 50.3
VMungo1383G2188 Vigna mungo HOM05D001463 ORTHO05D001282 3.3e-23 112.5 141 51.8
Phvul.001G238300 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 4.7e-22 108.6 141 50.4
Manes.10G021200 Manihot esculenta HOM05D001463 ORTHO05D001282 3.1e-21 105.9 123 56.1
Glyma.02G252500 Glycine max HOM05D001463 ORTHO05D001282 4.0e-21 105.5 138 48.6
MD01G1141700 Malus domestica HOM05D001463 ORTHO05D001282 5.2e-21 105.1 152 46.7
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 2.6e-20 102.8 142 48.6
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 5.8e-20 101.7 141 48.9
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 5.8e-20 101.7 146 47.3
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 7.5e-20 101.3 141 48.2
Sabra10G0151000 Salix brachista HOM05D001463 ORTHO05D001282 1.3e-19 100.5 143 47.6
Ca_05913_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 2.2e-19 99.8 139 45.3
Medtr5g081360 Medicago truncatula HOM05D001463 ORTHO05D001282 2.2e-19 99.8 141 46.8
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 6.4e-19 98.2 151 43.0
Lj6g0014007 Lotus japonicus HOM05D001463 ORTHO05D001282 1.1e-18 97.4 114 52.6
Lalb_Chr18g0052921 Lupinus albus HOM05D001463 ORTHO05D001282 2.4e-18 96.3 130 50.8
Thecc.10G031300 Theobroma cacao HOM05D001463 ORTHO05D001282 4.1e-18 95.5 149 43.0
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 9.2e-18 94.4 152 44.1
Psat2g037000 Pisum sativum HOM05D001463 ORTHO05D001282 9.2e-18 94.4 140 47.9
Ciclev10033996m.g Citrus clementina HOM05D001463 ORTHO05D001282 3.5e-17 92.4 115 51.3
Glyma.18G033302 Glycine max HOM05D001463 ORTHO05D001282 1.7e-16 90.1 131 45.8
MD07G1207300 Malus domestica HOM05D001463 ORTHO05D001282 1.7e-16 90.1 138 44.9
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 1.1e-15 87.4 141 42.6
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 9.5e-15 84.3 144 43.1
Lalb_Chr10g0104861 Lupinus albus HOM05D001463 ORTHO05D001282 1.2e-14 84.0 135 41.5
Eucgr.J00967 Eucalyptus grandis HOM05D001463 ORTHO05D001282 1.6e-14 83.6 168 40.5
DCAR_024854 Daucus carota HOM05D001463 ORTHO05D001282 4.7e-14 82.0 151 37.7
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 4.7e-14 82.0 141 44.0
Gohir.A05G302600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.2e-14 81.6 148 41.2
Gohir.A10G225400 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.2e-14 81.6 134 44.0
Gorai.011G273400 Gossypium raimondii HOM05D001463 ORTHO05D001282 3.1e-13 79.3 136 42.6
Gohir.D10G238356 Gossypium hirsutum HOM05D001463 ORTHO05D001282 4.0e-13 79.0 136 42.6
Atru.chr12.267 Acer truncatum HOM05D001463 ORTHO05D001282 6.8e-13 78.2 153 37.3
DCAR_027565 Daucus carota HOM05D001463 ORTHO05D001282 8.9e-13 77.8 174 35.6
Actinidia02381 Actinidia chinensis HOM05D001463 ORTHO05D001282 1.5e-12 77.0 130 40.8
Glyma.14G064100 Glycine max HOM05D001463 ORTHO05D001282 1.5e-12 77.0 139 40.3
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.6e-12 76.3 153 43.1
Lsat_1_v5_gn_2_117121 Lactuca sativa HOM05D001463 ORTHO05D001282 4.4e-12 75.5 134 38.8
HanXRQChr07g0202061 Helianthus annuus HOM05D001463 ORTHO05D001282 1.7e-11 73.6 131 38.2
Psat5g124880 Pisum sativum HOM05D001463 ORTHO05D001282 2.9e-11 72.8 119 44.5
Lj1A946T36 Lonicera japonica HOM05D001463 ORTHO05D001282 4.9e-11 72.0 114 44.7
Actinidia02902 Actinidia chinensis HOM05D001463 ORTHO05D001282 6.4e-11 71.6 96 47.9
HanXRQChr07g0202081 Helianthus annuus HOM05D001463 ORTHO05D001282 8.3e-11 71.2 132 38.6
Duzib106G1623 Durio zibethinus HOM05D001463 ORTHO05D001282 1.1e-10 70.9 130 40.8
ECA238G2806 Erigeron canadensis HOM05D001463 ORTHO05D001282 1.1e-10 70.9 147 37.4
Lj1A944G61 Lonicera japonica HOM05D001463 ORTHO05D001282 1.1e-10 70.9 106 45.3
DCAR_011755 Daucus carota HOM05D001463 ORTHO05D001282 1.4e-10 70.5 133 41.4
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 3.2e-10 69.3 155 36.8
LjContig00141g0025360 Lotus japonicus HOM05D001463 ORTHO05D001282 7.1e-10 68.2 142 40.1
TPR.G25823 Trifolium pratense HOM05D001463 ORTHO05D001282 1.2e-09 67.4 87 44.8
CANSAT56G2845 Cannabis sativa HOM05D001463 ORTHO05D001282 1.6e-09 67.0 116 38.8
HanXRQChr07g0202091 Helianthus annuus HOM05D001463 ORTHO05D001282 1.6e-09 67.0 153 35.9
Duzib106G0892 Durio zibethinus HOM05D001463 ORTHO05D001282 3.5e-09 65.9 131 38.9
Hma1.2p1_0026F.1_g016620 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 3.5e-09 65.9 141 36.2
PGR044G2554 Punica granatum HOM05D001463 ORTHO05D001282 6.0e-09 65.1 112 39.3
COL.COLO4_25564 Corchorus olitorius HOM05D001463 ORTHO05D001282 1.0e-08 64.3 64 59.4
Duzib241G0001 Durio zibethinus HOM05D001463 ORTHO05D001282 1.3e-08 63.9 132 38.6
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.3e-08 63.9 153 34.0
vmacro07015 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 1.7e-08 63.5 108 43.5
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 2.3e-08 63.2 139 38.1
Lalb_Chr15g0084471 Lupinus albus HOM05D001463 ORTHO05D001282 3.0e-08 62.8 61 55.7
Nitab4.5_0002822g0010 Nicotiana tabacum HOM05D001463 ORTHO05D001282 3.9e-08 62.4 78 50.0
LjContig00141g0012501 Lotus japonicus HOM05D001463 ORTHO05D001282 8.6e-08 61.2 144 37.5
TWI15G0258 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 8.6e-08 61.2 129 37.2
Carub.0004s2198 Capsella rubella HOM05D001463 ORTHO05D001282 1.1e-07 60.8 115 41.7
HanXRQChr14g0458451 Helianthus annuus HOM05D001463 ORTHO05D001282 1.1e-07 60.8 143 36.4
Peaxi162Scf00975g10014 Petunia axillaris HOM05D001463 ORTHO05D001282 1.5e-07 60.5 144 37.5
Hund04907 Selenicereus undatus HOM05D001463 ORTHO05D001282 1.5e-07 60.5 144 36.1
AL4G37420 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.9e-07 60.1 136 37.5
Sc11g0007610 Simmondsia chinensis HOM05D001463 ORTHO05D001282 2.5e-07 59.7 140 38.6
Peaxi162Scf00140g01313 Petunia axillaris HOM05D001463 ORTHO05D001282 3.3e-07 59.3 150 36.7
Peaxi162Scf00164g01525 Petunia axillaris HOM05D001463 ORTHO05D001282 3.3e-07 59.3 130 36.2
TPR.G34922 Trifolium pratense HOM05D001463 ORTHO05D001282 3.3e-07 59.3 141 30.5
TWI31G0608 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 3.3e-07 59.3 144 34.7
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 4.3e-07 58.9 151 36.4
Solyc05g052880.4 Solanum lycopersicum HOM05D001463 ORTHO05D001282 4.3e-07 58.9 125 38.4
Gorai.012G073500 Gossypium raimondii HOM05D001463 ORTHO05D001282 7.3e-07 58.2 121 37.2
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 7.3e-07 58.2 149 32.2
Sc10g0001920 Simmondsia chinensis HOM05D001463 ORTHO05D001282 7.3e-07 58.2 89 46.1
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 7.3e-07 58.2 154 32.5
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 9.5e-07 57.8 150 34.7
Eucgr.K03042 Eucalyptus grandis HOM05D001463 ORTHO05D001282 1.2e-06 57.4 147 37.4
CANSAT54G2006 Cannabis sativa HOM05D001463 ORTHO05D001282 1.6e-06 57.0 151 37.1
MSTRG.5625 Avicennia marina HOM05D001463 ORTHO05D001282 2.1e-06 56.6 111 40.5
FAN06G0722 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.1e-06 56.6 141 38.3
HanXRQChr07g0202041 Helianthus annuus HOM05D001463 ORTHO05D001282 2.1e-06 56.6 79 41.8
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 2.1e-06 56.6 147 35.4
Medtr5g012280 Medicago truncatula HOM05D001463 ORTHO05D001282 2.1e-06 56.6 139 36.0
Prupe.2G242500 Prunus persica HOM05D001463 ORTHO05D001282 2.1e-06 56.6 61 57.4
CARHR207250 Cardamine hirsuta HOM05D012265 ORTHO05D014407 2.8e-06 56.2 108 38.0
Duzib114G0853 Durio zibethinus HOM05D001463 ORTHO05D001282 2.8e-06 56.2 124 34.7
MBI14_g02863_MAGBIO Magnolia biondii HOM05D001463 ORTHO05D001282 2.8e-06 56.2 155 30.3
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 3.6e-06 55.8 151 35.8
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 4.7e-06 55.5 152 33.6
Aqoxy1G00796 Aquilegia oxysepala HOM05D001463 ORTHO05D001282 6.2e-06 55.1 136 33.8
FvH4_7g23590 Fragaria vesca HOM05D001463 ORTHO05D001282 6.2e-06 55.1 145 37.2
MD11G1091200 Malus domestica HOM05D001463 ORTHO05D001282 6.2e-06 55.1 145 35.2
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 6.2e-06 55.1 150 36.0
Duzib025G0001 Durio zibethinus HOM05D001463 ORTHO05D001282 8.1e-06 54.7 54 55.6


User provided reference genes

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