Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022707 Sechium edule HOM05D003165 ORTHO05D003589 1.7e-25 118.6 62 100.0
CAN.G210.10 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-21 105.9 62 88.7
CAN.G612.7 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-21 105.9 62 88.7
CAN.G741.20 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-21 105.9 62 88.7
RcHm_v2.0_CPg0502501 Rosa chinensis HOM05D003165 ORTHO05D003589 1.5e-21 105.5 62 93.5
Potri.013G138100 Populus trichocarpa HOM05D003165 ORTHO05D003589 9.5e-21 102.8 62 88.7
CSS0048851 Camellia sinensis var. sinensis HOM05D003165 ORTHO05D003589 1.6e-20 102.1 62 87.1
Hma1.2p1_4210F.1_g338473 Hydrangea macrophylla HOM05D003165 ORTHO05D003589 1.6e-20 102.1 62 88.7
Lalb_Chr07g0192871 Lupinus albus HOM05D003165 ORTHO05D003589 1.6e-20 102.1 62 83.9
CAN.G612.9 Capsicum annuum HOM05D003165 ORTHO05D003589 2.1e-20 101.7 62 85.5
Medtr4g050880 Medicago truncatula HOM05D003165 ORTHO05D003589 2.1e-20 101.7 62 85.5
DCAR_032467 Daucus carota HOM05D003165 ORTHO05D003589 2.8e-20 101.3 62 87.1
CAN.G68.4 Capsicum annuum HOM05D003165 ORTHO05D003589 6.2e-20 100.1 62 80.6
Solyc00g500049.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 6.2e-20 100.1 59 86.4
Solyc00g500132.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 6.2e-20 100.1 59 86.4
Solyc00g500202.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 6.2e-20 100.1 59 86.4
Solyc00g500331.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 6.2e-20 100.1 59 86.4
CARHR281860 Cardamine hirsuta HOM05D003165 ORTHO05D003589 8.0e-20 99.8 62 85.5
Migut.D01333 Erythranthe guttata HOM05D003165 ORTHO05D003589 1.4e-19 99.0 62 87.1
Migut.G00430 Erythranthe guttata HOM05D003165 ORTHO05D003589 1.4e-19 99.0 62 87.1
BolC2t10577H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolC7t41029H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolSC37t60775H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolSC45t60883H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolSC45t60931H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolSC46t60980H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BolSC49t61204H Brassica oleracea HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BraA07t28392Z Brassica rapa HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BraSC151t45688Z Brassica rapa HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
BraSC59t46517Z Brassica rapa HOM05D003165 ORTHO05D003589 2.3e-19 98.2 62 83.9
Solyc00g500293.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.3e-19 98.2 57 87.7
SalBow1G5840 Salvia bowleyana HOM05D003165 ORTHO05D003589 5.2e-19 97.1 62 87.1
HanXRQChr00c0126g0571841 Helianthus annuus HOM05D003165 ORTHO05D003589 6.8e-19 96.7 62 87.1
HanXRQCPg0579761 Helianthus annuus HOM05D003165 ORTHO05D003589 6.8e-19 96.7 62 87.1
CAN.G43.5 Capsicum annuum HOM05D003165 ORTHO05D003589 1.2e-18 95.9 62 79.0
SalBow3G1661 Salvia bowleyana HOM05D003165 ORTHO05D003589 1.2e-18 95.9 62 85.5
SalBow3G1899 Salvia bowleyana HOM05D003165 ORTHO05D003589 1.2e-18 95.9 62 85.5
BolSC29t60523H Brassica oleracea HOM05D003165 ORTHO05D003589 1.5e-18 95.5 60 83.3
HanXRQChr01g0011841 Helianthus annuus HOM05D003165 ORTHO05D003589 2.0e-18 95.1 62 85.5
Gohir.1Z049480 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.4e-18 94.4 62 80.6
Gohir.A04G039135 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.4e-18 94.4 62 80.6
ATCG00070 Arabidopsis thaliana HOM05D003165 ORTHO05D003589 4.4e-18 94.0 62 82.3
Gohir.A01G139684 Gossypium hirsutum HOM05D003165 ORTHO05D003589 4.4e-18 94.0 62 79.0
HanXRQChr17g0546761 Helianthus annuus HOM05D003165 ORTHO05D003589 4.4e-18 94.0 61 85.2
Nn020s41494 Nelumbo nucifera HOM05D003165 ORTHO05D003589 7.5e-18 93.2 62 80.6
PGR111G0090 Punica granatum HOM05D003165 ORTHO05D003589 7.5e-18 93.2 62 83.9
PSO548G0059 Papaver somniferum HOM05D003165 ORTHO05D003589 1.7e-17 92.0 62 80.6
Gorai.009G320900 Gossypium raimondii HOM05D003165 ORTHO05D003589 2.2e-17 91.7 62 77.4
GSVIVG01037458001 Vitis vinifera HOM05D003165 ORTHO05D003589 2.2e-17 91.7 62 77.4
arahy.Tifrunner.gnm1.ann1.IBW0TW Arachis hypogaea HOM05D003165 ORTHO05D003589 8.3e-17 89.7 58 81.0
Os11g0592350 Oryza sativa ssp. japonica HOM05D003165 ORTHO05D003589 1.4e-16 89.0 62 75.8
arahy.Tifrunner.gnm1.ann1.CR1XRQ Arachis hypogaea HOM05D003165 ORTHO05D009557 1.9e-16 88.6 57 80.7
Zm00001eb435330 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
Zm00001eb435800 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
Zm00001eb436880 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
Zm00001eb437300 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
Zm00001eb437760 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
Zm00001eb438270 Zea mays HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 77.4
LjContig00318g0024148 Lotus japonicus HOM05D003165 ORTHO05D003589 4.1e-16 87.4 58 77.6
Zm00001eb435610 Zea mays HOM05D003165 ORTHO05D003589 7.0e-16 86.7 62 75.8
Hund07985 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund08203 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund08798 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund11180 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund12720 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund12847 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund19323 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund22544 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund22777 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund26849 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27475 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27650 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27674 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27695 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27740 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27809 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27837 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27879 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27888 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27933 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund27948 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28041 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28062 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28127 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28256 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28320 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28326 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28533 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28601 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28648 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28774 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28899 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28908 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28967 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28986 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28990 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28995 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund28999 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29003 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29045 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29066 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29158 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29224 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29236 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29258 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29295 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29298 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29301 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29304 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29322 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29329 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29346 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29658 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund29688 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund30268 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund30351 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund30506 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund31022 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
Hund31232 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.7e-15 84.7 57 80.7
CAN.G485.2 Capsicum annuum HOM05D003165 ORTHO05D003589 6.0e-15 83.6 60 75.0
Peaxi162Scf00219g00034 Petunia axillaris HOM05D003165 ORTHO05D003589 6.0e-15 83.6 57 78.9
Gohir.D03G053280 Gossypium hirsutum HOM05D003165 ORTHO05D003589 7.8e-15 83.2 57 77.2
CAN.G364.3 Capsicum annuum HOM05D003165 ORTHO05D003589 1.3e-14 82.4 62 72.6
Lsat_1_v5_gn_5_110781 Lactuca sativa HOM05D000743 ORTHO05D003589 5.0e-14 80.5 55 80.0
Hund27862 Selenicereus undatus HOM05D003165 ORTHO05D003589 5.0e-14 80.5 48 83.3
Hund01831 Selenicereus undatus HOM05D003165 ORTHO05D003589 7.3e-13 76.6 56 75.0
Gohir.1Z050692 Gossypium hirsutum HOM05D003165 ORTHO05D003589 5.2e-11 70.5 40 87.5
Hund29292 Selenicereus undatus HOM05D003165 ORTHO05D003589 8.3e-09 63.2 37 81.1
CAN.G1872.7 Capsicum annuum HOM05D003165 ORTHO05D003589 2.4e-08 61.6 42 71.4
Glyma.12G095600 Glycine max HOM05D003165 ORTHO05D003589 2.4e-08 61.6 42 73.8
arahy.Tifrunner.gnm1.ann1.5MH7M9 Arachis hypogaea HOM05D003165 ORTHO05D003589 3.2e-08 61.2 45 71.1
MD03G1146700 Malus domestica HOM05D003165 ORTHO05D003589 9.2e-08 59.7 36 86.1
Gohir.A08G117233 Gossypium hirsutum HOM05D003165 ORTHO05D003589 4.6e-07 57.4 56 57.1


User provided reference genes

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