Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007203 Sechium edule HOM05D004182 ORTHO05D007321 1.5e-22 109.0 69 100.0
Sed0018388 Sechium edule HOM05D004182 ORTHO05D007321 1.5e-22 109.0 69 100.0
Sed0018833 Sechium edule HOM05D004182 ORTHO05D007321 1.5e-22 109.0 69 100.0
Sed0022676 Sechium edule HOM05D004182 ORTHO05D007321 1.5e-22 109.0 69 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 7.3e-22 106.7 68 98.5
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 5.2e-20 100.5 68 95.6
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 6.9e-20 100.1 68 92.6
Hma1.2p1_1418F.1_g282260 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 1.5e-19 99.0 69 76.8
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.5e-19 99.0 69 79.7
Nn349s46475 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.5e-19 99.0 69 79.7
Nn403s46571 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.5e-19 99.0 69 79.7
Nn4g25379 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.5e-19 99.0 69 79.7
arahy.Tifrunner.gnm1.ann1.04MME8 Arachis hypogaea HOM05D004182 ORTHO05D007321 5.8e-19 97.1 68 79.4
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 5.8e-19 97.1 68 77.9
arahy.Tifrunner.gnm1.ann1.GMF9U8 Arachis hypogaea HOM05D004182 ORTHO05D007321 5.8e-19 97.1 68 94.1
arahy.Tifrunner.gnm1.ann1.MI7UCB Arachis hypogaea HOM05D004182 ORTHO05D007321 5.8e-19 97.1 68 79.4
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 5.8e-19 97.1 68 77.9
arahy.Tifrunner.gnm1.ann1.TV6F30 Arachis hypogaea HOM05D004182 ORTHO05D007321 5.8e-19 97.1 68 77.9
BcaC04g20782 Brassica carinata HOM05D004182 ORTHO05D007321 7.6e-19 96.7 69 76.8
CARHR282390 Cardamine hirsuta HOM05D004182 ORTHO05D007321 7.6e-19 96.7 69 76.8
CARHR282490 Cardamine hirsuta HOM05D004182 ORTHO05D007321 7.6e-19 96.7 69 76.8
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 9.9e-19 96.3 68 91.2
BolSC29t60499H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC47t61059H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 9.9e-19 96.3 68 76.5
arahy.Tifrunner.gnm1.ann1.UTH6FS Arachis hypogaea HOM05D004182 ORTHO05D007321 1.3e-18 95.9 69 76.8
Sopen06g015050 Solanum pennellii HOM05D004182 ORTHO05D007321 1.3e-18 95.9 69 76.8
Sopen09g020810 Solanum pennellii HOM05D004182 ORTHO05D007321 1.3e-18 95.9 69 76.8
arahy.Tifrunner.gnm1.ann1.NV4G0I Arachis hypogaea HOM05D004182 ORTHO05D007321 3.8e-18 94.4 69 76.8
Nn031s41606 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.8e-18 94.4 70 78.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 4.9e-18 94.0 68 76.5
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 6.4e-18 93.6 68 75.0
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 6.4e-18 93.6 68 75.0
Gohir.1Z051066 Gossypium hirsutum HOM05D004182 ORTHO05D007321 8.4e-18 93.2 69 75.4
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 8.4e-18 93.2 69 75.4
Gohir.A12G165450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 8.4e-18 93.2 69 75.4
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.1e-17 92.8 69 73.9
arahy.Tifrunner.gnm1.ann1.73L6LP Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-17 92.0 69 75.4
BraSC58t46455Z Brassica rapa HOM05D004182 ORTHO05D007321 1.9e-17 92.0 68 73.5
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 3.2e-17 91.3 69 73.9
EL10As10g23966 Beta vulgaris HOM05D004182 ORTHO05D007321 3.2e-17 91.3 69 73.9
Sopen10g016590 Solanum pennellii HOM05D004182 ORTHO05D007321 9.3e-17 89.7 69 72.5
BraSC179t45780Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-16 88.6 64 75.0
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.1e-16 88.6 68 73.5
Hma1.2p1_0043F.1_g025830 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 2.7e-16 88.2 68 67.6
Lsat_1_v5_gn_0_47640 Lactuca sativa HOM05D004182 ORTHO05D007321 4.6e-16 87.4 69 72.5
Psat7g033600 Pisum sativum HOM05D004182 ORTHO05D007321 7.8e-16 86.7 69 72.5
Nn219s45281 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.0e-15 86.3 62 77.4
Nn442s46688 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.0e-15 86.3 62 77.4
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.7e-15 85.5 68 76.5
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 2.3e-15 85.1 68 70.6
Psat0s2011g0080 Pisum sativum HOM05D004182 ORTHO05D007321 3.0e-15 84.7 67 71.6
arahy.Tifrunner.gnm1.ann1.5LT2YD Arachis hypogaea HOM05D000580 ORTHO05D007321 3.9e-15 84.3 65 83.1
arahy.Tifrunner.gnm1.ann1.8WTZ4N Arachis hypogaea HOM05D004182 ORTHO05D007321 3.9e-15 84.3 63 74.6
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 1.5e-14 82.4 69 66.7
Glyma.09G133950 Glycine max HOM05D004182 ORTHO05D007321 2.5e-14 81.6 69 65.2
CARHR044290 Cardamine hirsuta HOM05D004182 ORTHO05D007321 9.6e-14 79.7 61 70.5
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 1.3e-13 79.3 68 66.2
Gohir.D05G169433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.3e-13 79.3 69 68.1
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 6.2e-13 77.0 63 69.8
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 8.1e-13 76.6 57 73.7
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 8.1e-13 76.6 63 71.4
Gohir.D13G041550 Gossypium hirsutum HOM05D004182 ORTHO05D007321 5.3e-12 73.9 69 62.3
Nn070s42382 Nelumbo nucifera HOM05D004182 ORTHO05D007321 9.0e-12 73.2 58 70.7
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 9.0e-12 73.2 67 62.7
Sc14g0004760 Simmondsia chinensis HOM05D004182 ORTHO05D007321 5.8e-11 70.5 63 66.7
Phvul.010G003500 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 1.7e-10 68.9 69 60.9
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 2.2e-10 68.6 58 65.5
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.9e-10 67.4 58 65.5
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.9e-10 67.4 58 65.5
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.9e-10 67.4 58 65.5
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.9e-10 67.4 58 65.5
Sed0012210 Sechium edule HOM05D004182 ORTHO05D007321 4.9e-10 67.4 69 59.4
Glyma.09G164000 Glycine max HOM05D004182 ORTHO05D007321 6.4e-10 67.0 55 69.1
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.1e-09 66.2 67 61.2
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-09 66.2 59 64.4
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.4e-09 65.9 58 63.8
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.4e-09 65.9 58 63.8
SHI36542 Sapria himalayana HOM05D004182 ORTHO05D007321 1.9e-09 65.5 69 58.0
Sc03g0005670 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.9e-09 65.5 58 63.8
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.9e-09 65.5 58 63.8
Sed0024115 Sechium edule HOM05D004182 ORTHO05D007321 3.2e-09 64.7 69 58.0
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 5.4e-09 63.9 58 62.1
Migut.I00342 Erythranthe guttata HOM05D004182 ORTHO05D007321 2.1e-08 62.0 38 89.5
Nn6g32823 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.1e-08 62.0 38 92.1
HPP92_028384 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
HPP92_028405 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
HPP92_028414 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
HPP92_028420 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
HPP92_028429 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
HPP92_028433 Vanilla planifolia HOM05D004182 ORTHO05D007321 6.0e-08 60.5 38 89.5
Nn8g40575 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.3e-07 58.5 38 84.2
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 3.0e-07 58.2 45 66.7
BcaC05g26432 Brassica carinata HOM05D004182 ORTHO05D007321 3.9e-07 57.8 38 84.2
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 5.1e-07 57.4 67 52.2
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 6.7e-07 57.0 45 64.4
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-06 56.2 43 67.4
Phvul.010G068400 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 1.1e-06 56.2 38 81.6
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.1e-06 56.2 58 56.9
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 1.9e-06 55.5 36 86.1
Phvul.003G041600 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 2.5e-06 55.1 38 78.9
Phvul.010G035850 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 2.5e-06 55.1 51 62.7
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.5e-06 55.1 49 65.3
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 4.3e-06 54.3 38 81.6
CAN.G1119.15 Capsicum annuum HOM05D002978 ORTHO05D003339 4.3e-06 54.3 62 51.6
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 7.4e-06 53.5 46 65.2


User provided reference genes

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