Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022639 Sechium edule HOM05D005327 ORTHO05D006655 1.0e-179 633.3 320 100.0
CsaV3_1G032190 Cucumis sativus L. HOM05D005327 ORTHO05D006655 4.7e-140 501.5 279 91.0
MELO3C017398.2 Cucumis melo HOM05D005327 ORTHO05D006655 8.9e-139 497.3 279 90.0
ClCG06G013980 Citrullus lanatus HOM05D005327 ORTHO05D006655 5.8e-138 494.6 279 88.5
GSVIVG01035172001 Vitis vinifera HOM05D005327 ORTHO05D006655 4.5e-106 388.7 284 69.4
DCAR_019096 Daucus carota HOM05D005327 ORTHO05D006655 1.3e-105 387.1 285 71.2
Dinv02614 Davidia involucrata HOM05D005327 ORTHO05D006655 2.2e-105 386.3 279 69.9
Hma1.2p1_0022F.1_g014820 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 4.9e-105 385.2 280 70.7
Duzib170G0396 Durio zibethinus HOM05D005327 ORTHO05D006655 5.5e-104 381.7 275 70.5
Prupe.1G067200 Prunus persica HOM05D005327 ORTHO05D006655 1.2e-103 380.6 278 70.1
TAR383G0919 Trochodendron aralioides HOM05D005327 ORTHO05D006655 1.6e-103 380.2 282 70.6
Hma1.2p1_0022F.1_g014810 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 2.1e-103 379.8 283 70.0
Ciclev10008332m.g Citrus clementina HOM05D005327 ORTHO05D006655 3.5e-103 379.0 279 67.7
Gohir.D05G002100 Gossypium hirsutum HOM05D005327 ORTHO05D006655 4.6e-103 378.6 279 69.9
Gorai.009G002000 Gossypium raimondii HOM05D005327 ORTHO05D006655 1.3e-102 377.1 279 69.5
FvH4_4g06430 Fragaria vesca HOM05D005327 ORTHO05D006655 5.1e-102 375.2 278 69.4
CiPaw.15G154300 Carya illinoinensis HOM05D005327 ORTHO05D006655 6.7e-102 374.8 294 66.0
FAN07G1666 Fragaria x ananassa HOM05D005327 ORTHO05D006655 2.5e-101 372.9 278 69.4
PSO063G6174 Papaver somniferum HOM05D005327 ORTHO05D006655 2.5e-101 372.9 279 67.4
PSO170G4496 Papaver somniferum HOM05D005327 ORTHO05D006655 2.5e-101 372.9 279 67.4
FAN12G0339 Fragaria x ananassa HOM05D005327 ORTHO05D006655 4.3e-101 372.1 278 69.1
MD13G1235800 Malus domestica HOM05D005327 ORTHO05D006655 5.7e-101 371.7 278 69.4
TWI34G0155 Tripterygium wilfordii HOM05D005327 ORTHO05D006655 9.6e-101 370.9 279 68.1
Haze_19034 Corylus avellana HOM05D005327 ORTHO05D006655 1.3e-100 370.5 304 64.5
Potri.006G070500 Populus trichocarpa HOM05D005327 ORTHO05D006655 1.6e-100 370.2 279 68.5
MD16G1240500 Malus domestica HOM05D005327 ORTHO05D006655 2.8e-100 369.4 278 68.3
Cpa.g.sc115.46 Carica papaya HOM05D005327 ORTHO05D006655 4.8e-100 368.6 280 65.4
FAN22G1263 Fragaria x ananassa HOM05D005327 ORTHO05D006655 4.8e-100 368.6 278 68.3
RcHm_v2.0_Chr4g0398191 Rosa chinensis HOM05D005327 ORTHO05D006655 4.8e-100 368.6 278 66.9
THA.LOC104826954 Tarenaya hassleriana HOM05D005327 ORTHO05D006655 1.4e-99 367.1 275 69.8
Rhsim01G0113000 Rhododendron simsii HOM05D005327 ORTHO05D006655 1.8e-99 366.7 279 67.0
HanXRQChr03g0067401 Helianthus annuus HOM05D005327 ORTHO05D006655 4.1e-99 365.5 280 67.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 4.1e-99 365.5 280 67.1
Lsat_1_v5_gn_7_59540 Lactuca sativa HOM05D005327 ORTHO05D006655 9.0e-99 364.4 281 67.6
Actinidia02486 Actinidia chinensis HOM05D005327 ORTHO05D006655 1.2e-98 364.0 280 67.5
Aqoxy7G02706 Aquilegia oxysepala HOM05D005327 ORTHO05D006655 1.2e-98 364.0 278 67.3
Lj4g0024487 Lotus japonicus HOM05D005327 ORTHO05D006655 1.5e-98 363.6 275 65.5
PGR044G1838 Punica granatum HOM05D005327 ORTHO05D006655 1.5e-98 363.6 279 69.2
Thecc.09G189900 Theobroma cacao HOM05D005327 ORTHO05D006655 2.0e-98 363.2 279 68.5
Atru.chr7.986 Acer truncatum HOM05D005327 ORTHO05D006655 2.6e-98 362.8 275 67.6
Aa31LG3G3560 Aethionema arabicum HOM05D005327 ORTHO05D006655 5.9e-98 361.7 274 70.1
Migut.J00826 Erythranthe guttata HOM05D005327 ORTHO05D006655 5.9e-98 361.7 279 66.7
Lalb_Chr05g0223671 Lupinus albus HOM05D005327 ORTHO05D006655 1.7e-97 360.1 279 65.9
Lalb_Chr09g0331881 Lupinus albus HOM05D005327 ORTHO05D006655 1.7e-97 360.1 282 66.3
Manes.15G099200 Manihot esculenta HOM05D005327 ORTHO05D006655 1.7e-97 360.1 275 66.9
Medtr8g101540 Medicago truncatula HOM05D005327 ORTHO05D006655 1.7e-97 360.1 280 65.7
AUR62021329 Chenopodium quinoa HOM05D005327 ORTHO05D006655 2.2e-97 359.8 275 68.7
AT3G10700 Arabidopsis thaliana HOM05D005327 ORTHO05D006655 5.0e-97 358.6 274 68.6
MSTRG.19391 Avicennia marina HOM05D005327 ORTHO05D006655 1.9e-96 356.7 280 66.1
Psat7g020320 Pisum sativum HOM05D005327 ORTHO05D006655 2.5e-96 356.3 275 66.5
Glyma.08G028600 Glycine max HOM05D005327 ORTHO05D006655 3.2e-96 355.9 279 65.9
Eucgr.C02197 Eucalyptus grandis HOM05D005327 ORTHO05D006655 4.2e-96 355.5 286 65.7
BraA05t22640Z Brassica rapa HOM05D005327 ORTHO05D006655 1.6e-95 353.6 274 69.0
Thhalv10020814m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 1.6e-95 353.6 274 67.9
Glyma.05G222000 Glycine max HOM05D005327 ORTHO05D006655 1.6e-95 353.6 279 64.5
AL3G22170 Arabidopsis lyrata HOM05D005327 ORTHO05D006655 2.7e-95 352.8 274 67.9
Ca_17407_v3 Cicer arietinum L. HOM05D005327 ORTHO05D006655 2.7e-95 352.8 276 65.2
Ah.11g044360 Amaranthus hybridus HOM05D005327 ORTHO05D006655 3.6e-95 352.4 278 65.8
Carub.0003s0993 Capsella rubella HOM05D005327 ORTHO05D006655 3.6e-95 352.4 274 67.5
AUR62033244 Chenopodium quinoa HOM05D005327 ORTHO05D006655 4.6e-95 352.1 275 67.6
SGA_v2.0_scaffold31G12725 Striga asiatica HOM05D005327 ORTHO05D006655 1.0e-94 350.9 279 65.6
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 1.8e-94 350.1 274 67.9
Sp3g09020 Schrenkiella parvula HOM05D005327 ORTHO05D006655 6.7e-94 348.2 293 64.8
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 1.9e-93 346.7 274 67.2
Phvul.002G303800 Phaseolus vulgaris HOM05D005327 ORTHO05D006655 2.5e-93 346.3 279 63.4
Nitab4.5_0004947g0030 Nicotiana tabacum HOM05D005327 ORTHO05D006655 4.3e-93 345.5 302 62.3
CARHR085280 Cardamine hirsuta HOM05D005327 ORTHO05D006655 5.7e-93 345.1 258 70.9
Sc14g0001350 Simmondsia chinensis HOM05D005327 ORTHO05D006655 5.7e-93 345.1 294 62.2
Sabra06G0052400 Salix brachista HOM05D005327 ORTHO05D006655 9.7e-93 344.4 303 62.0
ATR0626G140 Amborella trichopoda HOM05D005327 ORTHO05D006655 2.2e-92 343.2 286 61.5
Nn8g41033 Nelumbo nucifera HOM05D005327 ORTHO05D006655 1.0e-89 334.3 279 63.1
ECA240G0405 Erigeron canadensis HOM05D005327 ORTHO05D006655 3.8e-89 332.4 251 69.3
Solyc07g014640.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 3.8e-89 332.4 249 69.5
arahy.Tifrunner.gnm1.ann1.BX5CIC Arachis hypogaea HOM05D005327 ORTHO05D006655 4.2e-88 328.9 275 61.5
unitig_749.g14193 Utricularia gibba HOM05D005327 ORTHO05D006655 9.4e-88 327.8 275 65.1
Hund09044 Selenicereus undatus HOM05D005327 ORTHO05D006655 3.6e-87 325.9 302 58.9
arahy.Tifrunner.gnm1.ann1.X8NFG9 Arachis hypogaea HOM05D005327 ORTHO05D006655 6.1e-87 325.1 306 57.2
Lj5A713T18 Lonicera japonica HOM05D005327 ORTHO05D006655 2.0e-85 320.1 230 71.7
vmacro20765 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 4.1e-83 312.4 381 48.6
SEGI_37801 Sequoiadendron giganteum HOM05D005327 ORTHO05D006655 3.4e-82 309.3 279 56.6
CANSAT01G0668 Cannabis sativa HOM05D005327 ORTHO05D006655 1.4e-80 303.9 220 70.5
EL10Ac8g18314 Beta vulgaris HOM05D005327 ORTHO05D006655 3.9e-78 295.8 386 47.4
Sed0024331 Sechium edule HOM05D005327 ORTHO05D006655 3.9e-78 295.8 235 69.8
vmacro20791 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 1.4e-75 287.3 210 68.6
Nitab4.5_0000053g0140 Nicotiana tabacum HOM05D005327 ORTHO05D006655 2.4e-75 286.6 286 56.3
Sopen07g005500 Solanum pennellii HOM05D005327 ORTHO05D006655 2.0e-74 283.5 225 66.7
Zm00001eb071360 Zea mays HOM05D005327 ORTHO05D006655 5.9e-74 282.0 278 55.8
HPP92_000193 Vanilla planifolia HOM05D005327 ORTHO05D006655 1.0e-73 281.2 278 57.6
Os04g0608100 Oryza sativa ssp. japonica HOM05D005327 ORTHO05D006655 2.2e-73 280.0 276 55.8
CDE06G0639 Ceratophyllum demersum HOM05D005327 ORTHO05D006655 2.9e-73 279.6 272 55.1
Pp3c23_15130 Physcomitrium patens HOM05D005327 ORTHO05D006655 1.5e-72 277.3 275 54.2
unitig_77.g31482 Utricularia gibba HOM05D005327 ORTHO05D006655 2.3e-70 270.0 277 56.7
Peaxi162Scf00889g00111 Petunia axillaris HOM05D005327 ORTHO05D006655 1.3e-68 264.2 303 51.8
Mapoly0128s0021 Marchantia polymorpha HOM05D005327 ORTHO05D006655 4.1e-67 259.2 274 51.8
CBR_g4778 Chara braunii HOM05D005327 ORTHO05D000002 2.7e-66 256.5 276 52.9
SalBow6G3212 Salvia bowleyana HOM05D005327 ORTHO05D006655 2.7e-66 256.5 341 46.3
TPR.G25461 Trifolium pratense HOM05D005327 ORTHO05D006655 3.5e-66 256.1 206 65.5
BolC5t34395H Brassica oleracea HOM05D005327 ORTHO05D006655 4.7e-63 245.7 206 65.5
VMungo0251G1981 Vigna mungo HOM05D005327 ORTHO05D006655 5.2e-62 242.3 433 39.7
SMO356G0298 Selaginella moellendorffii HOM05D005327 ORTHO05D006655 2.4e-59 233.4 282 43.6
Oeu011821.1 Olea europaea HOM05D005327 ORTHO05D006655 3.2e-56 223.0 170 66.5
Gohir.A05G001832 Gossypium hirsutum HOM05D005327 ORTHO05D006655 1.4e-51 207.6 162 64.8
AagrBONN_evm.TU.Sc2ySwM_344.300 Anthoceros agrestis HOM05D005327 ORTHO05D006655 2.4e-51 206.8 253 48.2
HPP92_000244 Vanilla planifolia HOM05D005327 ORTHO05D006655 2.0e-45 187.2 163 62.6
QL11p009789 Quercus lobata HOM05D005327 ORTHO05D006655 8.3e-44 181.8 231 47.2
CAN.G33.6 Capsicum annuum HOM05D005327 ORTHO05D006655 1.4e-43 181.0 274 40.9
PGR044G0615 Punica granatum HOM05D005327 ORTHO05D006655 1.5e-40 171.0 166 57.8
Thhalv10026961m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 1.1e-38 164.9 118 72.9
COL.COLO4_23452 Corchorus olitorius HOM05D005327 ORTHO05D006655 1.4e-38 164.5 180 53.3
Solyc09g031880.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 1.1e-35 154.8 201 49.3
MCO11G047 Micromonas commoda HOM05D005327 ORTHO05D006655 2.3e-30 137.1 260 33.8
Sopen00g011970 Solanum pennellii HOM05D005327 ORTHO05D006655 9.2e-27 125.2 111 61.3
QL11p009810 Quercus lobata HOM05D005327 ORTHO05D006655 1.2e-23 114.8 73 71.2
TPR.G2647 Trifolium pratense HOM05D005327 ORTHO05D006655 7.1e-19 99.0 65 70.8
Gohir.A05G001766 Gossypium hirsutum HOM05D005327 ORTHO05D006655 7.3e-16 89.0 62 71.0
Sopen09g026020 Solanum pennellii HOM05D005327 ORTHO05D006655 6.2e-15 85.9 63 68.3
QL11p009732 Quercus lobata HOM05D005327 ORTHO05D006655 9.0e-14 82.0 58 63.8
Sabra18G0112000 Salix brachista HOM05D005327 ORTHO05D006655 2.0e-13 80.9 64 59.4
QL11p009748 Quercus lobata HOM05D005327 ORTHO05D000004 1.2e-10 71.6 59 66.1
SHI03098 Sapria himalayana HOM05D005327 ORTHO05D006655 1.6e-10 71.2 45 68.9
vmacro20790 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 3.5e-10 70.1 67 55.2
BcaC05g29437 Brassica carinata HOM05D005327 ORTHO05D006655 5.1e-09 66.2 59 61.0
CSS0006230 Camellia sinensis var. sinensis HOM05D005327 ORTHO05D006655 2.1e-07 60.8 33 87.9
SHI03087 Sapria himalayana HOM05D005327 ORTHO05D006655 2.1e-07 60.8 67 47.8
SHI03089 Sapria himalayana HOM05D005327 ORTHO05D006655 2.1e-07 60.8 48 62.5
HanXRQChr17g0539291 Helianthus annuus HOM05D002718 ORTHO05D003269 9.0e-06 55.5 103 32.0


User provided reference genes

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