Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022517 Sechium edule HOM05D001618 ORTHO05D001486 6.1e-55 217.2 110 100.0
Sed0002943 Sechium edule HOM05D001618 ORTHO05D001486 2.7e-42 175.3 102 89.2
ClCG11G016410 Citrullus lanatus HOM05D001618 ORTHO05D001486 7.3e-32 140.6 155 56.1
CsaV3_4G031860 Cucumis sativus L. HOM05D001618 ORTHO05D001486 3.2e-27 125.2 156 52.6
MELO3C010571.2 Cucumis melo HOM05D001618 ORTHO05D001486 7.8e-26 120.6 158 50.6
Glyma.08G236300 Glycine max HOM05D001618 ORTHO05D001486 4.6e-18 94.7 130 50.0
Lalb_Chr01g0007171 Lupinus albus HOM05D001618 ORTHO05D001486 6.0e-18 94.4 127 51.2
Phvul.011G174700 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 1.0e-17 93.6 127 52.0
Lj3g0002752 Lotus japonicus HOM05D001618 ORTHO05D001486 1.7e-17 92.8 127 50.4
Potri.011G143400 Populus trichocarpa HOM05D001618 ORTHO05D001486 3.9e-17 91.7 125 48.0
CAN.G943.36 Capsicum annuum HOM05D001618 ORTHO05D001486 5.1e-17 91.3 128 46.1
CiPaw.03G179500 Carya illinoinensis HOM05D001618 ORTHO05D001486 1.1e-16 90.1 133 45.1
Manes.14G016100 Manihot esculenta HOM05D001618 ORTHO05D001486 1.1e-16 90.1 127 43.3
Sabra16G0310500 Salix brachista HOM05D001618 ORTHO05D001486 2.5e-16 89.0 126 46.8
DCAR_013740 Daucus carota HOM05D001618 ORTHO05D001486 3.3e-16 88.6 129 45.0
Sabra11G0128100 Salix brachista HOM05D001618 ORTHO05D001486 3.3e-16 88.6 125 46.4
VMungo1127G1601 Vigna mungo HOM05D001618 ORTHO05D001486 4.3e-16 88.2 127 48.8
Sopen07g034610 Solanum pennellii HOM05D001618 ORTHO05D001486 5.6e-16 87.8 124 46.0
Ciclev10023709m.g Citrus clementina HOM05D001618 ORTHO05D001486 7.3e-16 87.4 127 43.3
Potri.001G458000 Populus trichocarpa HOM05D001618 ORTHO05D001486 7.3e-16 87.4 127 45.7
Nn7g37979 Nelumbo nucifera HOM05D001618 ORTHO05D001486 1.6e-15 86.3 121 46.3
Prupe.4G140200 Prunus persica HOM05D001618 ORTHO05D001486 2.1e-15 85.9 137 44.5
QL04p073875 Quercus lobata HOM05D001618 ORTHO05D001486 2.1e-15 85.9 136 42.6
Duzib268G0166 Durio zibethinus HOM05D001618 ORTHO05D001486 3.6e-15 85.1 126 45.2
Gohir.1Z049325 Gossypium hirsutum HOM05D001618 ORTHO05D001486 3.6e-15 85.1 125 47.2
Gohir.A01G038900 Gossypium hirsutum HOM05D001618 ORTHO05D001486 3.6e-15 85.1 144 42.4
Oeu003829.1 Olea europaea HOM05D001618 ORTHO05D001486 3.6e-15 85.1 131 44.3
Peaxi162Scf00452g00826 Petunia axillaris HOM05D001618 ORTHO05D001486 3.6e-15 85.1 124 44.4
TAR626G1833 Trochodendron aralioides HOM05D001618 ORTHO05D001486 3.6e-15 85.1 122 43.4
Duzib213G0738 Durio zibethinus HOM05D001618 ORTHO05D001486 4.7e-15 84.7 132 45.5
TPR.G9409 Trifolium pratense HOM05D001618 ORTHO05D001486 4.7e-15 84.7 126 46.0
Aqoxy7G01508 Aquilegia oxysepala HOM05D001618 ORTHO05D001486 8.1e-15 84.0 124 46.8
Gorai.002G036000 Gossypium raimondii HOM05D001618 ORTHO05D001486 1.1e-14 83.6 144 41.7
Thecc.07G153100 Theobroma cacao HOM05D001618 ORTHO05D001486 1.1e-14 83.6 124 46.8
CSS0001227 Camellia sinensis var. sinensis HOM05D001618 ORTHO05D001486 2.4e-14 82.4 133 39.8
AUR62040862 Chenopodium quinoa HOM05D001618 ORTHO05D001486 2.4e-14 82.4 127 44.9
Hma1.2p1_0637F.1_g193550 Hydrangea macrophylla HOM05D001618 ORTHO05D001486 5.2e-14 81.3 125 44.8
Atru.chr12.2174 Acer truncatum HOM05D001618 ORTHO05D001486 9.0e-14 80.5 103 46.6
Cfa019928 Carpinus fangiana HOM05D001618 ORTHO05D001486 1.5e-13 79.7 133 44.4
RcHm_v2.0_Chr5g0026611 Rosa chinensis HOM05D001618 ORTHO05D001486 1.5e-13 79.7 139 40.3
TWI38G2010 Tripterygium wilfordii HOM05D001618 ORTHO05D001486 1.5e-13 79.7 128 41.4
Cfa019433 Carpinus fangiana HOM05D001618 ORTHO05D001486 2.0e-13 79.3 131 44.3
Haze_08552 Corylus avellana HOM05D001618 ORTHO05D001486 3.4e-13 78.6 128 43.0
FAN25G3714 Fragaria x ananassa HOM05D001618 ORTHO05D001486 7.6e-13 77.4 129 45.0
Gohir.D01G026600 Gossypium hirsutum HOM05D001618 ORTHO05D001486 9.9e-13 77.0 137 39.4
SalBow8G1925 Salvia bowleyana HOM05D001618 ORTHO05D001486 9.9e-13 77.0 110 46.4
Glyma.07G074900 Glycine max HOM05D001618 ORTHO05D001486 1.7e-12 76.3 126 43.7
FvH4_3g15820 Fragaria vesca HOM05D001618 ORTHO05D001486 2.9e-12 75.5 136 40.4
FAN11G0765 Fragaria x ananassa HOM05D001618 ORTHO05D001486 2.9e-12 75.5 136 40.4
AUR62037622 Chenopodium quinoa HOM05D001618 ORTHO05D001486 4.9e-12 74.7 127 38.6
VMungo0331G1754 Vigna mungo HOM05D001618 ORTHO05D001486 4.9e-12 74.7 130 41.5
MSTRG.16111 Avicennia marina HOM05D001618 ORTHO05D001486 8.4e-12 73.9 139 40.3
MD10G1202100 Malus domestica HOM05D001618 ORTHO05D001486 1.1e-11 73.6 136 40.4
Phvul.010G094500 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 1.4e-11 73.2 130 43.1
FAN16G3043 Fragaria x ananassa HOM05D001618 ORTHO05D001486 1.9e-11 72.8 140 39.3
MSTRG.14539 Avicennia marina HOM05D001618 ORTHO05D001486 2.4e-11 72.4 132 39.4
CANSAT80G2159 Cannabis sativa HOM05D001618 ORTHO05D001486 4.2e-11 71.6 140 38.6
Glyma.03G014800 Glycine max HOM05D001618 ORTHO05D001486 4.2e-11 71.6 127 43.3
MD05G1219800 Malus domestica HOM05D001618 ORTHO05D001486 4.2e-11 71.6 129 41.9
ATR0763G232 Amborella trichopoda HOM05D001618 ORTHO05D001486 7.1e-11 70.9 124 41.9
arahy.Tifrunner.gnm1.ann1.YT59NJ Arachis hypogaea HOM05D001618 ORTHO05D001486 9.3e-11 70.5 123 41.5
Migut.M01559 Erythranthe guttata HOM05D001618 ORTHO05D001486 9.3e-11 70.5 134 41.8
Eucgr.F01454 Eucalyptus grandis HOM05D001618 ORTHO05D001486 6.0e-10 67.8 133 43.6
Ah.16g106590 Amaranthus hybridus HOM05D001618 ORTHO05D001486 7.8e-10 67.4 124 41.9
HanXRQChr03g0078101 Helianthus annuus HOM05D001618 ORTHO05D001486 3.0e-09 65.5 136 37.5
PGR083G0576 Punica granatum HOM05D001618 ORTHO05D001486 8.7e-09 63.9 156 35.3
Sc06g0001550 Simmondsia chinensis HOM05D001618 ORTHO05D001486 8.7e-09 63.9 127 37.8
Lsat_1_v5_gn_7_70901 Lactuca sativa HOM05D001618 ORTHO05D001486 4.3e-08 61.6 146 37.0
SGA_v2.0_scaffold186G40221 Striga asiatica HOM05D001618 ORTHO05D001486 9.6e-08 60.5 140 33.6
Aa31LG8G180 Aethionema arabicum HOM05D001618 ORTHO05D001486 3.6e-07 58.5 133 33.8
Dinv19620 Davidia involucrata HOM05D001618 ORTHO05D001486 1.1e-06 57.0 105 38.1
EL10Ac2g03346 Beta vulgaris HOM05D001618 ORTHO05D001486 3.1e-06 55.5 39 59.0
THA.LOC104810258 Tarenaya hassleriana HOM05D001618 ORTHO05D001486 3.1e-06 55.5 131 34.4


User provided reference genes

Program Settings