Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.8e-79 298.1 152 100.0
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 8.2e-50 200.7 157 73.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.9e-47 192.2 155 74.2
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.5e-38 163.3 155 61.9
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.4e-28 130.2 112 66.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.6e-21 106.7 119 52.1
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 3.0e-20 102.4 124 44.4
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.2e-19 100.5 151 44.4
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.6e-19 99.4 131 46.6
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 3.4e-19 99.0 140 45.0
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 6.3e-18 94.7 147 42.9
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.4e-17 93.6 150 42.7
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.4e-17 92.8 130 47.7
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.1e-17 92.0 140 43.6
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 9.2e-17 90.9 144 42.4
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 9.2e-17 90.9 119 49.6
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.2e-16 90.5 127 43.3
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.2e-16 90.5 143 41.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.7e-16 89.4 118 45.8
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.7e-16 89.4 132 45.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 3.5e-16 89.0 117 47.9
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.5e-16 88.6 130 44.6
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 7.8e-16 87.8 125 47.2
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.7e-15 86.7 117 48.7
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.7e-15 86.7 145 45.5
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-15 86.3 130 46.2
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.9e-15 85.9 130 45.4
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.9e-15 85.9 115 45.2
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.0e-15 85.1 152 43.4
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.6e-15 84.7 126 42.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 6.6e-15 84.7 103 47.6
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 6.6e-15 84.7 132 43.9
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 8.6e-15 84.3 130 44.6
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.1e-14 84.0 130 46.2
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.5e-14 83.6 132 43.2
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.9e-14 83.2 117 44.4
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.5e-14 82.8 142 38.7
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.3e-14 82.4 120 42.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.6e-14 81.6 147 34.7
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 7.3e-14 81.3 142 35.2
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.2e-13 80.5 140 35.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.2e-13 80.5 125 42.4
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.6e-13 80.1 125 42.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 2.1e-13 79.7 118 46.6
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.6e-13 79.0 142 40.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.6e-13 79.0 142 35.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.0e-13 77.8 150 40.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 8.0e-13 77.8 142 42.3
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.0e-12 77.4 116 37.9
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-12 77.0 133 41.4
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.8e-12 76.6 145 35.9
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 3.0e-12 75.9 120 42.5
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.0e-12 75.9 137 38.0
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.0e-12 75.5 135 40.7
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 6.8e-12 74.7 124 39.5
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 6.8e-12 74.7 125 44.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.9e-12 74.3 121 41.3
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 8.9e-12 74.3 127 38.6
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.2e-11 73.9 133 41.4
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.2e-11 73.9 124 37.9
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.2e-11 73.9 122 41.0
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.5e-11 73.6 142 38.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 3.4e-11 72.4 127 38.6
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 4.4e-11 72.0 140 37.9
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.4e-11 72.0 135 44.4
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 4.4e-11 72.0 141 41.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.4e-11 72.0 144 39.6
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 4.4e-11 72.0 140 37.1
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 5.7e-11 71.6 122 40.2
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 7.5e-11 71.2 136 36.8
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 7.5e-11 71.2 136 36.8
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 7.5e-11 71.2 136 36.8
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.7e-10 70.1 110 40.9
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.2e-10 69.7 140 35.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.2e-10 69.7 139 36.0
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.2e-10 69.7 129 37.2
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 2.9e-10 69.3 138 36.2
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 2.9e-10 69.3 140 37.1
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 2.9e-10 69.3 120 38.3
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 3.7e-10 68.9 126 38.1
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 3.7e-10 68.9 127 39.4
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.1e-09 67.4 133 37.6
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 1.4e-09 67.0 109 42.2
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.8e-09 66.6 135 36.3
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.8e-09 66.6 94 43.6
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.8e-09 66.6 124 39.5
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.8e-09 66.6 138 35.5
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.4e-09 66.2 130 37.7
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.4e-09 66.2 116 41.4
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 3.2e-09 65.9 138 41.3
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 3.2e-09 65.9 143 37.1
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 4.1e-09 65.5 108 41.7
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 4.1e-09 65.5 126 41.3
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 7.0e-09 64.7 136 38.2
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 7.0e-09 64.7 132 35.6
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 9.2e-09 64.3 121 43.0
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.6e-08 63.5 103 40.8
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 2.0e-08 63.2 141 33.3
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 2.0e-08 63.2 132 34.8
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 2.0e-08 63.2 134 35.8
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.7e-08 62.8 112 40.2
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.7e-08 62.8 116 37.9
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.7e-08 62.8 152 36.2
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 3.5e-08 62.4 148 33.8
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 4.6e-08 62.0 132 34.8
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 4.6e-08 62.0 101 42.6
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 5.9e-08 61.6 115 38.3
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 7.8e-08 61.2 102 40.2
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 7.8e-08 61.2 134 34.3
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.0e-07 60.8 101 42.6
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.3e-07 60.5 106 36.8
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.3e-07 60.5 121 38.8
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.3e-07 59.7 103 37.9
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 5.0e-07 58.5 137 35.8
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 6.6e-07 58.2 148 33.1
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 8.6e-07 57.8 104 36.5
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 1.1e-06 57.4 113 38.9
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 1.1e-06 57.4 113 38.9
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 1.1e-06 57.4 113 38.9
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 1.1e-06 57.4 107 40.2
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.5e-06 57.0 104 33.7
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 2.5e-06 56.2 159 32.1
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 2.5e-06 56.2 129 34.1
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 3.3e-06 55.8 141 31.9
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 3.3e-06 55.8 117 35.0
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 3.3e-06 55.8 131 35.1
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.3e-06 55.5 142 35.9


User provided reference genes

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