Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 7.1e-63 243.8 128 100.0
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.0e-45 186.8 115 85.2
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.3e-45 185.7 135 75.6
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 6.3e-43 177.6 135 73.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 6.1e-38 161.0 92 87.0
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.0e-37 160.2 92 87.0
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.0e-37 160.2 119 70.6
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 3.0e-37 158.7 95 86.3
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 3.0e-37 158.7 94 83.0
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.9e-37 158.3 126 69.8
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 8.8e-37 157.1 91 86.8
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 8.8e-37 157.1 92 84.8
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 1.1e-36 156.8 126 69.8
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.5e-36 156.4 101 79.2
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.5e-36 156.4 101 79.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.5e-36 156.4 130 68.5
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 2.0e-36 156.0 91 85.7
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.0e-36 156.0 127 68.5
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 2.5e-36 155.6 108 75.0
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 3.3e-36 155.2 96 79.2
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.3e-36 155.2 126 69.0
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.3e-36 155.2 90 86.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.3e-36 155.2 111 75.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 4.3e-36 154.8 104 76.9
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.3e-36 154.8 126 66.7
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 4.3e-36 154.8 92 83.7
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 4.3e-36 154.8 100 77.0
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 4.3e-36 154.8 97 80.4
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 7.4e-36 154.1 96 82.3
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 7.4e-36 154.1 111 75.7
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 9.7e-36 153.7 92 85.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.3e-35 153.3 91 81.3
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.7e-35 152.9 90 82.2
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.2e-35 152.5 91 80.2
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.2e-35 152.5 92 82.6
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 2.8e-35 152.1 91 83.5
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.8e-35 151.4 91 82.4
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 4.8e-35 151.4 90 81.1
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 4.8e-35 151.4 92 79.3
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 4.8e-35 151.4 120 71.7
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 4.8e-35 151.4 90 85.6
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 8.2e-35 150.6 131 66.4
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 8.2e-35 150.6 100 76.0
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 8.2e-35 150.6 134 64.2
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 8.2e-35 150.6 93 80.6
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 8.2e-35 150.6 118 68.6
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.1e-34 150.2 92 80.4
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.4e-34 149.8 90 82.2
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.4e-34 149.8 92 81.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.8e-34 149.4 126 63.5
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.4e-34 149.1 91 81.3
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.1e-34 148.7 91 81.3
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 3.1e-34 148.7 117 66.7
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 3.1e-34 148.7 90 78.9
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 4.1e-34 148.3 88 81.8
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 4.1e-34 148.3 93 77.4
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 5.3e-34 147.9 115 67.0
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 5.3e-34 147.9 101 75.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 6.9e-34 147.5 118 66.9
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.1e-34 147.1 99 75.8
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.2e-33 146.7 99 79.8
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.2e-33 146.7 90 81.1
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.5e-33 146.4 88 80.7
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.0e-33 146.0 86 83.7
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.6e-33 145.6 121 64.5
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.6e-33 145.6 123 66.7
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.6e-33 145.6 123 66.7
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 2.6e-33 145.6 90 80.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.6e-33 145.6 90 80.0
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.6e-33 145.6 121 67.8
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 4.5e-33 144.8 123 65.9
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 4.5e-33 144.8 123 65.9
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 5.9e-33 144.4 88 79.5
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 7.7e-33 144.1 105 73.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.0e-32 143.7 102 74.5
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.3e-32 143.3 90 78.9
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.2e-32 142.5 88 81.8
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.2e-32 142.5 102 71.6
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 2.2e-32 142.5 115 69.6
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 2.9e-32 142.1 92 76.1
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.8e-32 141.7 84 82.1
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.8e-32 141.7 91 76.9
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 5.0e-32 141.4 91 75.8
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.0e-32 141.4 92 76.1
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 6.5e-32 141.0 84 82.1
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.1e-31 140.2 140 58.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.1e-31 140.2 106 69.8
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 3.2e-31 138.7 83 83.1
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.2e-31 138.7 100 71.0
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 4.2e-31 138.3 113 69.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 7.2e-31 137.5 82 82.9
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 9.4e-31 137.1 91 68.1
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.2e-30 136.7 83 83.1
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.2e-30 136.7 84 77.4
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.6e-30 136.3 82 81.7
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 7.9e-30 134.0 97 73.2
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.8e-29 132.9 88 69.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 8.8e-29 130.6 85 77.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.0e-28 129.4 84 77.4
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 7.4e-28 127.5 119 61.3
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.7e-27 126.3 127 58.3
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.3e-24 116.7 89 66.3
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 3.3e-20 102.1 111 56.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.2e-16 89.4 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 9.4e-15 84.0 46 82.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.5e-07 60.1 46 60.9
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 4.2e-07 58.5 39 76.9


User provided reference genes

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