Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 7.6e-253 876.7 452 100.0
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.8e-207 725.3 452 82.5
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.5e-203 713.0 492 78.3
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 4.1e-198 694.9 472 78.6
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.8e-156 556.6 447 63.1
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.1e-155 553.9 452 64.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.1e-155 553.9 452 64.6
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.9e-155 553.1 455 64.4
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 3.3e-155 552.4 456 62.9
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 4.8e-154 548.5 440 63.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 8.1e-154 547.7 454 64.1
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.4e-153 546.2 419 65.2
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.6e-152 542.7 409 66.0
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.4e-152 542.3 446 62.1
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 9.9e-152 540.8 437 64.1
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.7e-151 540.0 422 65.2
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.2e-151 539.7 439 63.8
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.2e-151 539.7 450 62.7
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 2.2e-151 539.7 424 64.4
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.9e-151 539.3 406 67.2
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 6.4e-151 538.1 409 64.5
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 8.4e-151 537.7 450 62.7
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 8.4e-151 537.7 420 63.1
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.4e-150 537.0 445 62.2
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 5.5e-150 535.0 444 61.9
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.5e-149 532.3 421 63.9
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 3.5e-149 532.3 453 63.1
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 3.5e-149 532.3 423 62.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.5e-149 532.3 409 66.0
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 4.6e-149 531.9 445 61.8
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 5.1e-148 528.5 460 60.4
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.3e-147 525.4 430 64.2
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.4e-147 524.6 401 65.8
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 2.8e-146 522.7 457 61.1
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.8e-145 520.0 438 61.2
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.2e-144 517.3 438 60.7
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 1.2e-144 517.3 407 65.4
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 4.5e-144 515.4 434 61.5
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.2e-143 513.1 432 62.0
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 4.9e-143 511.9 430 62.3
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 8.4e-143 511.1 460 58.9
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 8.4e-143 511.1 405 64.7
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-142 510.8 408 64.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 7.1e-142 508.1 461 60.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.3e-142 507.7 407 63.9
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 9.3e-142 507.7 446 59.2
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.2e-141 507.3 421 61.3
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.7e-141 506.1 455 60.2
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.6e-141 505.4 431 62.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.0e-140 504.2 404 62.6
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.3e-140 503.8 459 60.1
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.0e-140 502.7 409 63.1
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 6.7e-140 501.5 460 59.8
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 6.7e-140 501.5 409 64.1
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.1e-139 500.7 409 63.8
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.1e-139 500.7 452 58.2
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.9e-139 500.0 409 63.8
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 4.3e-139 498.8 409 61.1
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 4.3e-139 498.8 426 59.6
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.7e-139 498.4 453 59.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 5.7e-139 498.4 407 61.9
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.6e-138 496.9 381 65.9
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 3.7e-138 495.7 459 58.0
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 4.8e-138 495.4 449 57.5
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 8.2e-138 494.6 405 61.2
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.1e-137 492.7 409 63.6
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 4.1e-137 492.3 409 63.3
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.0e-136 490.0 407 59.2
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.9e-135 486.1 410 61.0
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 3.8e-135 485.7 409 59.7
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.6e-133 480.3 378 64.0
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.4e-132 477.2 453 57.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 3.9e-132 475.7 452 58.2
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 5.1e-132 475.3 413 59.8
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 7.4e-131 471.5 397 61.5
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 6.9e-129 464.9 378 61.4
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.2e-128 464.2 362 65.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 3.4e-128 462.6 411 60.8
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 4.2e-126 455.7 417 60.0
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.6e-125 453.8 437 56.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.0e-123 446.8 333 68.5
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.8e-116 423.7 337 65.3
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 2.8e-114 416.4 359 59.3
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 3.7e-114 416.0 330 65.2
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 8.2e-114 414.8 334 63.2
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.0e-112 410.2 424 52.6
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.1e-109 400.2 401 52.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.7e-103 380.6 297 65.7
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 1.9e-102 377.1 373 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 3.0e-100 369.8 412 46.6
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 7.0e-97 358.6 297 62.3
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.2e-96 357.8 297 62.0
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.5e-94 350.9 406 46.8
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 3.3e-94 349.7 380 48.9
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 4.2e-94 349.4 429 44.1
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.0e-92 344.7 265 66.0
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 3.0e-92 343.2 265 66.0
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 9.8e-91 338.2 447 43.0
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 4.1e-89 332.8 282 60.3
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 4.4e-83 312.8 334 48.8
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 2.9e-82 310.1 411 43.1
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.4e-76 291.2 228 61.8
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.2e-50 204.1 243 45.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.0e-47 195.3 164 57.9
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.7e-47 194.5 139 65.5
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.2e-41 173.7 171 57.9
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.5e-40 170.2 146 61.0
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 5.1e-39 166.4 155 54.2
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 2.1e-37 161.0 147 54.4
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.3e-30 136.7 119 58.0
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.4e-27 127.1 96 65.6
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.5e-25 119.8 121 55.4
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 7.1e-25 119.4 91 64.8
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 8.7e-23 112.5 110 50.0
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.1e-22 112.1 87 63.2
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.5e-06 58.5 50 56.0


User provided reference genes

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