Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 3.9e-39 164.5 92 100.0
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 1.1e-28 129.8 94 78.7
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 1.5e-25 119.4 94 72.3
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 3.0e-23 111.7 88 72.7
Sed0016926 Sechium edule HOM05D007785 ORTHO05D008997 5.7e-22 107.5 94 67.0
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 4.4e-14 81.3 95 54.7
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 2.2e-13 79.0 95 53.7
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 2.8e-13 78.6 94 51.1
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 1.1e-12 76.6 97 54.6
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.4e-12 76.3 94 51.1
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.6e-11 72.8 88 52.3
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 1.6e-11 72.8 94 53.2
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.6e-11 72.8 94 53.2
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.6e-11 72.8 94 53.2
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.6e-11 72.8 94 52.1
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 2.0e-11 72.4 92 48.9
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.7e-11 72.0 89 50.6
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 4.5e-11 71.2 94 52.1
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 5.9e-11 70.9 94 52.1
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 7.8e-11 70.5 96 49.0
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 7.8e-11 70.5 93 50.5
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 1.7e-10 69.3 86 48.8
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 3.8e-10 68.2 94 51.1
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 3.8e-10 68.2 87 48.3
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 3.8e-10 68.2 92 52.2
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 6.6e-10 67.4 86 45.3
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.5e-09 66.2 92 50.0
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 1.9e-09 65.9 92 48.9
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 2.5e-09 65.5 86 47.7
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.5e-09 65.5 86 44.2
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 5.6e-09 64.3 79 50.6
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.6e-09 64.3 83 48.2
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 9.5e-09 63.5 81 46.9
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 2.8e-08 62.0 81 49.4
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 3.6e-08 61.6 87 41.4
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 6.1e-08 60.8 96 44.8
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.0e-07 60.1 81 49.4
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 1.0e-07 60.1 92 47.8
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.4e-07 59.7 86 47.7
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.8e-07 59.3 76 52.6
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.8e-07 59.3 78 51.3
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.8e-07 59.3 93 48.4
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 2.3e-07 58.9 86 40.7
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.3e-07 58.9 91 47.3
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 2.3e-07 58.9 81 49.4
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 3.0e-07 58.5 85 42.4
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 4.0e-07 58.2 86 44.2
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 6.8e-07 57.4 81 44.4
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 6.8e-07 57.4 87 41.4
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 6.8e-07 57.4 86 41.9
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 8.9e-07 57.0 101 42.6
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.2e-06 56.6 93 47.3
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 2.6e-06 55.5 86 43.0
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 2.6e-06 55.5 69 47.8
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 2.6e-06 55.5 75 45.3
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 5.7e-06 54.3 97 40.2
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 5.7e-06 54.3 69 46.4
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 7.5e-06 53.9 87 43.7
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 7.5e-06 53.9 80 42.5
Gohir.A09G198400 Gossypium hirsutum HOM05D012518 ORTHO05D008997 9.8e-06 53.5 93 40.9


User provided reference genes

Program Settings