Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 0.0e+00 1459.1 727 100.0
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 0.0e+00 1291.9 730 88.4
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 0.0e+00 1267.7 782 82.9
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 0.0e+00 1118.2 708 75.4
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 0.0e+00 1104.7 724 72.5
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 0.0e+00 1100.9 709 74.3
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 0.0e+00 1097.0 715 74.4
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 0.0e+00 1090.9 709 73.9
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 0.0e+00 1088.2 711 73.4
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 0.0e+00 1077.4 717 72.7
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.3e-310 1069.3 711 72.2
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.2e-310 1068.5 711 72.0
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-309 1066.2 711 72.0
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-309 1066.2 711 72.0
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 1.2e-308 1062.8 728 70.9
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 2.7e-308 1061.6 748 74.6
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 6.0e-308 1060.4 729 71.5
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.7e-307 1058.9 717 71.1
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 3.9e-307 1057.7 729 70.2
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 8.7e-307 1056.6 715 71.2
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-306 1056.2 706 71.5
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.2e-303 1046.2 726 70.0
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 2.6e-303 1045.0 715 70.9
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.6e-300 1035.8 715 71.2
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 2.1e-300 1035.4 717 70.6
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.7e-300 1035.0 726 70.0
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 6.0e-300 1033.9 715 70.1
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 6.0e-300 1033.9 726 70.0
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 3.0e-299 1031.6 726 69.0
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 3.7e-297 1024.6 711 69.1
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 5.8e-295 1017.3 743 68.1
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.5e-290 1002.7 722 67.7
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.5e-290 1002.7 722 67.7
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 4.3e-290 1001.1 724 66.4
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 1.6e-289 999.2 724 69.2
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 3.7e-289 998.0 712 69.4
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 4.0e-288 994.6 717 66.0
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 1.2e-287 993.0 721 68.5
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 2.0e-287 992.3 709 67.0
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.6e-287 991.9 730 67.0
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 1.9e-285 985.7 730 67.0
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 3.2e-285 984.9 730 66.3
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 5.5e-285 984.2 711 67.7
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 1.2e-284 983.0 728 65.7
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 6.0e-284 980.7 703 67.9
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.0e-283 979.9 671 70.9
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 3.0e-283 978.4 716 68.9
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 5.1e-283 977.6 727 67.3
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 3.3e-282 974.9 717 66.5
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 3.3e-282 974.9 727 67.3
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 2.4e-280 968.8 709 65.9
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 4.1e-280 968.0 706 68.0
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 2.6e-279 965.3 715 65.9
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 5.9e-279 964.1 727 66.7
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 7.6e-279 963.8 715 65.9
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 7.6e-279 963.8 722 65.1
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.5e-277 958.7 689 67.1
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 2.3e-275 952.2 716 65.1
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 1.5e-274 949.5 703 66.7
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 1.9e-274 949.1 728 65.1
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.8e-273 945.3 724 64.4
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 4.8e-273 944.5 728 64.0
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 8.2e-273 943.7 703 66.4
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 8.2e-273 943.7 728 64.7
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 5.9e-271 937.6 715 64.5
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 1.4e-269 932.9 722 65.2
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.8e-267 926.0 694 65.7
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.3e-262 909.8 712 65.3
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.6e-260 902.9 717 63.9
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 3.0e-259 898.7 840 56.0
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 1.7e-257 892.9 587 74.1
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 7.0e-256 887.5 725 61.8
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.0e-251 873.6 730 60.4
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 3.7e-249 865.1 721 60.5
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.1e-248 863.6 709 62.6
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.8e-248 862.8 736 59.9
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 2.4e-248 862.4 713 61.0
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 1.6e-247 859.8 730 59.7
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 1.6e-247 859.8 730 59.7
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 1.9e-245 852.8 734 59.0
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 3.2e-245 852.0 728 60.9
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 9.4e-245 850.5 715 60.4
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 2.1e-244 849.4 722 60.4
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.0e-243 847.0 713 60.3
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 2.0e-242 842.8 543 73.7
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.2e-241 839.3 615 65.5
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 1.6e-239 833.2 745 57.7
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 1.3e-238 830.1 627 65.9
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 3.7e-233 812.0 661 62.6
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 1.8e-203 713.4 723 52.4
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.6e-202 709.5 612 59.5
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 3.8e-201 705.7 622 56.3
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.5e-194 683.7 473 69.6
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 1.8e-187 660.2 454 70.7
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 3.7e-180 636.0 473 64.3
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 1.4e-179 634.0 482 63.1
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 1.0e-174 617.8 735 45.0
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 3.3e-173 612.8 740 45.9
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 3.7e-172 609.4 463 65.9
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 4.2e-168 595.9 451 64.3
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 8.5e-161 571.6 453 66.2
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.2e-159 567.8 480 60.6
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 3.3e-149 533.1 401 66.1
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.2e-148 530.4 430 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 8.2e-148 528.5 688 43.6
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 2.0e-138 497.3 381 64.3
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.8e-131 474.2 682 42.4
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 8.5e-129 465.3 749 38.9
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 1.1e-128 464.9 413 58.6
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 2.7e-127 460.3 737 38.9
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.0e-118 431.8 308 68.5
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.2e-109 401.7 327 61.5
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.5e-109 401.4 293 67.9
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 2.9e-108 397.1 387 56.8
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 4.4e-85 320.1 193 79.3
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 6.2e-79 299.7 212 66.5
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 3.3e-72 277.3 245 58.8
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-53 215.7 315 41.6
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 7.9e-42 176.4 143 64.3
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.3e-39 169.1 159 51.6
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 1.7e-39 168.7 150 55.3
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.8e-39 167.9 114 70.2
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 2.6e-37 161.4 96 75.0
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.5e-37 160.6 161 54.0
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 7.4e-32 143.3 525 27.8
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 1.7e-28 132.1 589 26.1
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.9e-28 131.3 124 57.3
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 1.6e-26 125.6 124 53.2
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.7e-26 124.8 267 34.1
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 5.7e-24 117.1 95 55.8
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.1e-22 110.9 82 63.4
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.7e-20 105.5 84 64.3
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 6.5e-20 103.6 63 76.2
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 1.2e-16 92.8 74 59.5
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 9.8e-16 89.7 115 50.4
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 1.4e-14 85.9 61 65.6
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.5e-13 81.3 61 65.6
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 5.9e-13 80.5 56 67.9
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 2.2e-12 78.6 51 70.6
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 1.6e-10 72.4 60 58.3
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 2.6e-08 65.1 51 58.8
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 9.8e-08 63.2 110 35.5
FAN06G4723 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.4e-06 59.3 37 67.6
COL.COLO4_37048 Corchorus olitorius HOM05D005191 ORTHO05D006725 2.4e-06 58.5 40 67.5
COL.COLO4_06980 Corchorus olitorius HOM05D005191 ORTHO05D006725 4.1e-06 57.8 40 65.0


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