Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 1.3e-140 503.1 247 100.0
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 6.6e-65 251.5 317 50.5
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.6e-55 220.3 307 48.2
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.4e-51 207.2 247 53.0
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 3.2e-43 179.5 274 44.2
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.5e-40 169.9 237 46.0
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 1.3e-39 167.5 258 43.0
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.3e-39 167.5 258 45.7
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 2.1e-39 166.8 261 42.1
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 6.2e-39 165.2 254 46.1
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.4e-38 164.1 261 41.4
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 2.4e-38 163.3 261 41.4
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 3.1e-38 162.9 262 40.8
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 5.3e-38 162.2 321 38.6
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 5.3e-38 162.2 265 41.5
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 6.9e-38 161.8 259 41.3
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 6.9e-38 161.8 267 43.4
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.2e-37 161.0 259 43.6
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.5e-37 160.6 262 40.5
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.0e-37 160.2 266 41.7
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 2.0e-37 160.2 267 44.2
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 3.4e-37 159.5 264 43.2
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 4.4e-37 159.1 258 43.0
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.4e-37 159.1 272 41.2
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 4.4e-37 159.1 261 42.1
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 5.8e-37 158.7 258 41.1
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.7e-36 157.1 252 40.5
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 1.7e-36 157.1 251 41.8
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 2.2e-36 156.8 256 43.8
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 4.9e-36 155.6 254 42.9
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 6.4e-36 155.2 262 40.1
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 6.4e-36 155.2 265 39.2
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 6.4e-36 155.2 265 39.2
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 1.1e-35 154.5 275 40.0
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.4e-35 154.1 265 40.4
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 1.9e-35 153.7 346 35.8
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 2.4e-35 153.3 249 41.8
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 3.2e-35 152.9 252 40.1
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 4.2e-35 152.5 258 41.5
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 3.5e-34 149.4 276 39.9
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 7.9e-34 148.3 260 40.4
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 7.9e-34 148.3 252 42.5
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 7.9e-34 148.3 272 40.4
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 1.3e-33 147.5 246 41.9
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 3.0e-33 146.4 266 39.1
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 3.9e-33 146.0 258 38.8
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 5.1e-33 145.6 277 38.3
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 8.7e-33 144.8 273 39.6
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 8.7e-33 144.8 266 40.2
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 1.1e-32 144.4 267 38.6
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 1.5e-32 144.1 244 41.4
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 2.5e-32 143.3 271 39.5
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 2.5e-32 143.3 261 40.6
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 7.3e-32 141.7 259 40.5
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 9.6e-32 141.4 229 44.1
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.3e-31 141.0 241 40.2
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 2.1e-31 140.2 222 40.5
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 2.8e-31 139.8 260 41.2
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 3.6e-31 139.4 262 39.3
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 4.8e-31 139.0 216 39.8
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 4.8e-31 139.0 264 37.9
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 4.8e-31 139.0 263 38.8
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 4.8e-31 139.0 261 37.9
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 6.2e-31 138.7 245 42.0
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.1e-30 137.9 262 38.2
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-30 137.9 251 39.8
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-30 137.9 251 39.8
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 1.1e-30 137.9 251 39.8
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 1.8e-30 137.1 253 39.5
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.8e-30 137.1 253 39.9
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.4e-30 136.7 215 39.1
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 2.4e-30 136.7 242 42.1
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 4.0e-30 136.0 246 41.1
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 5.3e-30 135.6 244 39.8
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.2e-29 134.4 234 41.0
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 1.5e-29 134.0 276 37.3
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 4.5e-29 132.5 274 38.3
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 5.8e-29 132.1 201 41.3
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 9.9e-29 131.3 278 35.6
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 1.3e-28 131.0 224 41.1
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 1.3e-28 131.0 244 37.3
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 2.9e-28 129.8 273 37.4
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 2.9e-28 129.8 269 37.5
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 3.8e-28 129.4 271 36.9
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 6.4e-28 128.6 272 34.9
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.4e-27 127.5 233 40.3
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 1.9e-27 127.1 250 38.0
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 2.4e-27 126.7 280 34.6
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 5.5e-27 125.6 258 36.4
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 5.5e-27 125.6 238 37.8
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 5.5e-27 125.6 262 35.5
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 7.1e-27 125.2 272 35.7
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 9.3e-27 124.8 259 35.1
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 3.5e-26 122.9 208 38.9
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 7.9e-26 121.7 236 37.3
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-25 121.3 240 37.1
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-25 121.3 240 37.1
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 1.0e-25 121.3 240 37.1
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 1.0e-25 121.3 240 37.1
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 1.8e-25 120.6 260 35.0
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 3.0e-25 119.8 228 39.9
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 3.0e-25 119.8 210 39.0
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 8.7e-25 118.2 237 37.6
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.9e-24 117.1 238 37.0
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 1.9e-24 117.1 264 34.8
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 2.5e-24 116.7 178 43.3
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 7.4e-24 115.2 257 34.6
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 1.3e-23 114.4 341 31.7
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 2.8e-23 113.2 244 36.5
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 3.7e-23 112.8 224 34.4
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 3.7e-23 112.8 249 34.9
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 3.7e-23 112.8 217 36.4
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 4.8e-23 112.5 299 32.8
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 4.8e-23 112.5 249 34.5
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 8.1e-23 111.7 230 36.5
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.1e-22 111.3 203 37.4
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 1.4e-22 110.9 298 31.2
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 2.4e-22 110.2 254 37.8
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 3.1e-22 109.8 250 33.2
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 4.0e-22 109.4 258 34.5
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 1.2e-21 107.8 210 38.6
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 2.0e-21 107.1 204 39.7
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 2.0e-21 107.1 240 35.4
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 2.6e-21 106.7 244 35.2
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 2.6e-21 106.7 244 35.2
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 3.4e-21 106.3 210 36.7
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 4.5e-21 105.9 240 35.4
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 5.8e-21 105.5 279 32.6
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 7.6e-21 105.1 174 40.8
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 1.3e-20 104.4 240 35.0
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.3e-20 104.4 261 33.0
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 1.7e-20 104.0 259 32.8
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.7e-20 104.0 218 35.8
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 2.2e-20 103.6 234 34.6
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 3.8e-20 102.8 265 32.8
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 4.9e-20 102.4 266 31.2
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 6.5e-20 102.1 140 45.7
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 8.4e-20 101.7 251 34.7
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 8.4e-20 101.7 218 33.0
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 1.1e-19 101.3 256 31.6
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 1.1e-19 101.3 219 37.4
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 1.1e-19 101.3 197 38.6
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 2.5e-19 100.1 159 40.9
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 9.3e-19 98.2 225 34.7
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 1.6e-18 97.4 262 31.7
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 2.7e-18 96.7 286 31.8
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 3.5e-18 96.3 260 30.4
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 3.5e-18 96.3 260 30.4
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 3.5e-18 96.3 260 30.4
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 4.6e-18 95.9 274 31.4
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 2.3e-17 93.6 247 31.6
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 6.7e-17 92.0 382 26.7
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 9.6e-16 88.2 395 27.1
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 2.1e-15 87.0 150 37.3
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 2.1e-15 87.0 251 33.5
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 3.7e-15 86.3 193 34.2
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 1.8e-14 84.0 163 38.0
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 2.4e-14 83.6 286 30.1
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 4.1e-14 82.8 275 29.5
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 1.5e-13 80.9 265 32.5
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 2.2e-12 77.0 163 33.7
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 5.0e-12 75.9 194 31.4
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 8.4e-12 75.1 261 29.5
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 3.3e-08 63.2 173 31.8
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 3.3e-08 63.2 155 34.2
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 4.3e-08 62.8 248 29.8
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.2e-07 60.5 154 34.4
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 2.2e-07 60.5 100 41.0


User provided reference genes

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