Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 3.0e-298 1027.7 501 100.0
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 1.2e-262 909.4 500 87.4
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 2.1e-259 898.7 501 86.2
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 4.9e-208 728.0 508 74.4
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 2.7e-198 695.7 498 70.5
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 4.7e-195 684.9 500 68.6
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 1.2e-193 680.2 494 69.8
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 1.5e-193 679.9 496 69.8
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.5e-193 679.9 499 69.1
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 5.8e-193 677.9 498 69.3
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 3.7e-192 675.2 515 67.6
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 8.3e-192 674.1 492 69.3
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 1.9e-191 672.9 494 69.0
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 1.9e-191 672.9 512 67.0
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 9.2e-191 670.6 500 68.6
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 1.2e-190 670.2 496 68.5
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 6.0e-190 667.9 499 68.7
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 6.0e-190 667.9 504 68.1
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 6.0e-190 667.9 501 68.1
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 3.0e-189 665.6 496 69.6
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 5.1e-189 664.8 493 69.2
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 4.3e-188 661.8 497 68.4
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 1.2e-187 660.2 499 67.9
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 2.4e-186 656.0 497 68.2
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 8.9e-186 654.1 505 66.5
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 1.2e-185 653.7 487 68.0
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 1.5e-185 653.3 495 67.1
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 4.4e-185 651.7 492 67.1
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 5.8e-185 651.4 498 67.5
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 7.6e-185 651.0 496 66.9
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 3.8e-184 648.7 489 67.3
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 4.9e-184 648.3 497 68.0
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 1.4e-183 646.7 485 69.3
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 2.4e-183 646.0 496 67.9
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 4.2e-183 645.2 498 66.1
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 4.2e-183 645.2 505 66.7
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 1.6e-182 643.3 491 67.0
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 2.7e-182 642.5 494 67.8
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 1.0e-181 640.6 487 68.4
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 1.7e-181 639.8 491 66.6
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 1.5e-180 636.7 498 65.5
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 7.3e-180 634.4 484 67.8
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 1.2e-179 633.6 495 67.7
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 1.6e-179 633.3 501 65.1
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 2.8e-179 632.5 491 66.4
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 1.8e-178 629.8 486 66.9
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 2.4e-178 629.4 489 67.5
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 2.4e-178 629.4 489 67.5
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 9.0e-178 627.5 489 67.1
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 5.8e-177 624.8 491 67.2
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 7.6e-177 624.4 490 64.7
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 2.2e-176 622.9 485 66.2
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 2.2e-176 622.9 489 64.4
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 6.4e-176 621.3 488 66.8
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 1.1e-175 620.5 491 64.0
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 1.1e-175 620.5 542 61.3
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 2.7e-174 615.9 486 66.3
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 5.1e-173 611.7 485 66.6
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 8.1e-171 604.4 487 63.9
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 1.4e-170 603.6 538 60.4
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 2.0e-169 599.7 487 63.2
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 1.3e-168 597.0 494 64.0
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 1.7e-168 596.7 486 63.2
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.7e-168 596.7 503 63.2
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 5.4e-167 591.7 496 62.7
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 4.6e-166 588.6 508 62.4
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 4.6e-166 588.6 461 66.2
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 7.9e-166 587.8 485 62.7
Potri.016G021400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.1e-164 583.9 496 63.1
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 1.5e-164 583.6 490 63.7
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 1.8e-162 576.6 482 63.9
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 9.0e-162 574.3 491 60.7
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 9.0e-162 574.3 501 61.1
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 3.8e-160 568.9 490 61.4
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 3.2e-159 565.8 481 62.0
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 3.3e-156 555.8 492 61.2
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 5.6e-156 555.1 488 59.8
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 9.0e-154 547.7 490 61.4
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 1.2e-153 547.4 499 58.5
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 2.0e-153 546.6 503 59.0
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 1.0e-152 544.3 491 59.3
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 1.0e-152 544.3 485 59.0
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 1.4e-151 540.4 482 59.8
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 3.5e-150 535.8 483 57.8
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 7.9e-150 534.6 497 57.9
Cpa.g.sc8.301 Carica papaya HOM05D005440 ORTHO05D007314 1.0e-149 534.3 419 65.6
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 1.9e-148 530.0 481 59.7
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 2.2e-147 526.6 556 52.7
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 1.5e-145 520.4 479 58.7
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 8.5e-144 514.6 416 64.9
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 7.2e-143 511.5 493 55.0
Thecc.01G171200 Theobroma cacao HOM05D005440 ORTHO05D007314 4.3e-140 502.3 388 66.2
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 7.4e-140 501.5 518 54.6
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 9.1e-138 494.6 263 87.5
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 1.5e-137 493.8 510 53.3
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 7.7e-137 491.5 483 58.6
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 1.4e-133 480.7 511 54.2
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 1.1e-132 477.6 477 53.9
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 5.7e-132 475.3 393 62.6
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 9.7e-132 474.6 405 61.5
Nitab4.5_0000496g0020 Nicotiana tabacum HOM05D005440 ORTHO05D007314 1.2e-129 467.6 463 56.6
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 1.9e-127 460.3 482 53.5
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 2.0e-124 450.3 516 48.6
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 5.7e-124 448.7 541 47.0
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 4.1e-122 442.6 267 77.5
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.0e-120 438.0 462 54.3
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 5.5e-119 432.2 865 35.1
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 2.3e-117 426.8 428 56.1
Psat5g108080 Pisum sativum HOM05D005440 ORTHO05D007314 5.3e-114 415.6 353 62.9
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 9.5e-103 378.3 401 55.4
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 5.7e-100 369.0 488 46.7
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 2.9e-96 356.7 490 45.7
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-92 343.6 642 36.8
Nitab4.5_0002704g0030 Nicotiana tabacum HOM05D005440 ORTHO05D007314 5.0e-88 329.3 442 47.7
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 1.5e-87 327.8 223 68.2
Ah.01g013380 Amaranthus hybridus HOM05D005440 ORTHO05D007314 4.1e-82 309.7 355 50.7
CARHR125960 Cardamine hirsuta HOM05D005440 ORTHO05D007314 3.4e-76 290.0 191 70.7
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 2.9e-75 287.0 490 35.7
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 6.2e-70 269.2 265 49.1
SGA_v2.0_scaffold35G13960 Striga asiatica HOM05D005440 ORTHO05D007314 9.6e-63 245.4 132 84.8
PRCOL_00002828 Prasinoderma coloniale HOM05D005440 ORTHO05D007314 9.0e-61 238.8 283 43.1
Psat5g108160 Pisum sativum HOM05D005440 ORTHO05D007314 7.1e-58 229.2 124 84.7
Cfa026418 Carpinus fangiana HOM05D005440 ORTHO05D007314 4.6e-57 226.5 284 40.8
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 6.0e-57 226.1 298 41.3
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 6.2e-54 216.1 406 38.2
Lj4C830T18 Lonicera japonica HOM05D005440 ORTHO05D007314 9.3e-50 202.2 113 83.2
CARHR125950 Cardamine hirsuta HOM05D005440 ORTHO05D007314 4.5e-44 183.3 106 83.0
Hund08219 Selenicereus undatus HOM05D005440 ORTHO05D007314 4.2e-34 150.2 86 82.6
Lj4A830T38 Lonicera japonica HOM05D005440 ORTHO05D007314 1.5e-23 115.2 76 71.1
RcHm_v2.0_Chr2g0172691 Rosa chinensis HOM05D005440 ORTHO05D007314 1.5e-20 105.1 59 81.4
Hund08218 Selenicereus undatus HOM05D005440 ORTHO05D007314 6.5e-19 99.8 80 61.2
CARHR125940 Cardamine hirsuta HOM05D005440 ORTHO05D034043 5.7e-15 86.7 66 56.1
RcHm_v2.0_Chr5g0059521 Rosa chinensis HOM05D005440 ORTHO05D007314 6.3e-14 83.2 41 85.4
Dinv02985 Davidia involucrata HOM05D005440 ORTHO05D034043 3.1e-13 80.9 53 75.5
SEGI_40090 Sequoiadendron giganteum HOM05D005440 ORTHO05D034043 2.0e-12 78.2 69 55.1
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 3.8e-11 73.9 94 43.6
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 2.5e-10 71.2 49 65.3
CAN.G1245.16 Capsicum annuum HOM05D001673 ORTHO05D022156 5.5e-10 70.1 45 71.1
CAN.G80.1 Capsicum annuum HOM05D001673 ORTHO05D022156 7.2e-10 69.7 72 50.0


User provided reference genes

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