Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 2.4e-147 526.2 421 100.0
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 3.3e-125 452.6 422 90.5
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 1.1e-123 447.6 422 89.8
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 2.5e-120 436.4 422 84.4
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 3.0e-118 429.5 422 82.9
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 2.6e-101 373.2 409 77.5
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 9.1e-99 364.8 406 80.3
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 2.0e-98 363.6 409 75.1
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 2.2e-97 360.1 402 75.9
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 1.5e-96 357.5 407 78.6
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 8.0e-95 351.7 399 76.2
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 8.8e-94 348.2 410 74.9
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 1.2e-93 347.8 421 72.7
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 3.3e-93 346.3 404 75.7
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 7.5e-93 345.1 404 75.5
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 1.7e-92 344.0 408 72.8
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 4.8e-92 342.4 406 74.4
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 6.3e-92 342.0 405 76.0
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.1e-91 341.3 407 77.4
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 3.1e-91 339.7 406 77.1
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 1.2e-90 337.8 409 70.2
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 1.2e-90 337.8 418 74.9
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.7e-90 336.7 421 73.9
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 3.5e-90 336.3 404 78.7
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 5.9e-90 335.5 399 73.7
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.3e-89 334.3 404 79.0
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 2.9e-89 333.2 421 74.6
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 6.5e-89 332.0 404 73.3
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 6.5e-89 332.0 410 76.8
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 1.1e-88 331.3 421 74.6
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 3.2e-88 329.7 405 73.3
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 3.2e-88 329.7 406 72.2
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 3.2e-88 329.7 406 72.2
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 5.5e-88 328.9 404 77.7
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 7.2e-88 328.6 405 72.6
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 7.2e-88 328.6 405 72.6
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 1.2e-87 327.8 404 76.5
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.6e-87 327.4 403 72.7
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 2.1e-87 327.0 404 75.7
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 2.7e-87 326.6 405 73.6
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 1.0e-86 324.7 405 77.3
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 2.3e-86 323.6 465 58.7
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 3.0e-86 323.2 399 78.4
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 3.0e-86 323.2 406 76.4
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 6.8e-86 322.0 404 74.5
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 1.5e-85 320.9 401 76.3
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 2.0e-85 320.5 407 74.2
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 3.4e-85 319.7 409 70.9
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 5.7e-85 318.9 412 74.0
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 1.3e-84 317.8 396 75.8
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 2.2e-84 317.0 407 73.5
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 3.7e-84 316.2 403 71.0
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 6.3e-84 315.5 404 74.8
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 6.3e-84 315.5 404 75.0
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 1.4e-83 314.3 404 73.3
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 3.1e-83 313.2 404 76.5
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 7.0e-83 312.0 404 72.3
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 2.0e-82 310.5 406 74.6
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 2.0e-82 310.5 404 69.8
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 4.5e-82 309.3 404 74.5
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 4.5e-82 309.3 406 71.2
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 5.9e-82 308.9 407 74.0
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 2.3e-81 307.0 406 74.1
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 2.9e-81 306.6 395 71.9
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.5e-80 303.5 404 73.5
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 5.5e-80 302.4 399 71.2
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 2.1e-79 300.4 404 70.8
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 2.8e-79 300.1 406 70.2
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 3.6e-79 299.7 403 69.0
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 8.0e-79 298.5 405 75.3
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 2.3e-78 297.0 420 68.3
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 6.8e-78 295.4 403 67.0
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.4e-75 287.0 413 65.4
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 2.4e-75 287.0 406 69.5
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.7e-73 280.8 437 54.7
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 3.8e-73 279.6 401 70.6
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 3.8e-73 279.6 400 65.8
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.1e-72 278.1 411 67.2
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 4.3e-72 276.2 404 68.6
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 3.6e-71 273.1 404 67.1
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 1.9e-67 260.8 540 48.9
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 3.0e-65 253.4 398 59.8
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 3.9e-65 253.1 396 71.0
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 8.6e-65 251.9 418 67.7
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 2.5e-64 250.4 404 66.1
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 3.3e-64 250.0 403 70.2
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 4.7e-63 246.1 398 70.9
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.7e-60 237.7 403 68.0
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 2.9e-60 236.9 423 55.3
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 3.2e-59 233.4 400 70.0
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.6e-58 231.1 410 67.3
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 2.1e-58 230.7 403 68.5
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 2.7e-58 230.3 408 62.0
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.4e-51 208.0 419 53.7
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 4.1e-51 206.5 181 67.4
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 1.2e-50 204.9 400 65.2
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 3.3e-48 196.8 404 67.1
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 1.6e-47 194.5 392 66.8
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 3.6e-47 193.4 182 63.2
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 4.0e-46 189.9 399 62.4
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 6.8e-46 189.1 403 64.5
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 6.4e-44 182.6 176 56.8
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 6.9e-38 162.5 182 47.3
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 2.7e-34 150.6 398 60.8
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 7.8e-34 149.1 111 63.1
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 7.8e-34 149.1 111 63.1
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 7.8e-34 149.1 153 58.2
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 3.9e-33 146.7 110 65.5
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 1.1e-30 138.7 108 62.0
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 1.3e-28 131.7 106 61.3
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 4.9e-28 129.8 119 51.3
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.4e-27 128.3 399 37.1
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 4.2e-19 100.1 70 64.3
BcaC04g21805 Brassica carinata HOM05D006667 ORTHO05D008387 3.4e-13 80.5 75 77.3
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.3e-09 67.8 140 33.6
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 5.1e-09 66.6 140 32.9
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.5e-08 65.1 140 32.9
Sed0004605 Sechium edule HOM05D001818 ORTHO05D001780 1.5e-08 65.1 146 28.8
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 1.9e-08 64.7 89 59.6
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 1.9e-08 64.7 89 62.9
C09p27300 Brassica napus HOM05D006667 ORTHO05D008387 2.5e-08 64.3 142 47.2
Nitab4.5_0004209g0030 Nicotiana tabacum HOM05D001818 ORTHO05D001780 3.3e-08 63.9 152 29.6
vmacro11170 Vaccinium macrocarpon HOM05D001818 ORTHO05D001780 3.3e-08 63.9 95 37.9
Rhsim01G0068800 Rhododendron simsii HOM05D001818 ORTHO05D001780 9.7e-08 62.4 93 36.6
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.3e-07 62.0 142 32.4
Lsat_1_v5_gn_6_21521 Lactuca sativa HOM05D001818 ORTHO05D001780 1.6e-07 61.6 180 24.4
BolC6t38487H Brassica oleracea HOM05D006667 ORTHO05D008387 2.2e-07 61.2 89 65.2
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 2.2e-07 61.2 142 31.7
Nitab4.5_0000028g0350 Nicotiana tabacum HOM05D001818 ORTHO05D001780 3.7e-07 60.5 152 28.9
unitig_899.g15441 Utricularia gibba HOM05D001818 ORTHO05D001780 6.3e-07 59.7 133 30.1
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 8.2e-07 59.3 137 29.2
Aa31LG1G15450 Aethionema arabicum HOM05D001818 ORTHO05D001780 1.4e-06 58.5 173 26.0
PGR142G1182 Punica granatum HOM05D001818 ORTHO05D001780 1.8e-06 58.2 93 36.6
CBR_g11992 Chara braunii HOM05D002125 ORTHO05D008387 2.4e-06 57.8 70 44.3
Haze_04113 Corylus avellana HOM05D002125 ORTHO05D002105 2.4e-06 57.8 103 31.1
Lsat_1_v5_gn_5_95460 Lactuca sativa HOM05D001818 ORTHO05D001780 2.4e-06 57.8 93 35.5
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 3.1e-06 57.4 137 28.5
Ah.08g209960 Amaranthus hybridus HOM05D002125 ORTHO05D002105 4.1e-06 57.0 145 29.0
MELO3C004498.2 Cucumis melo HOM05D001818 ORTHO05D001780 4.1e-06 57.0 93 35.5
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 4.1e-06 57.0 137 29.2
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 4.1e-06 57.0 137 28.5
Sc09g0008280 Simmondsia chinensis HOM05D001818 ORTHO05D001780 6.9e-06 56.2 89 37.1
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 9.0e-06 55.8 141 30.5


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