Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022116 Sechium edule HOM05D008070 ORTHO05D001888 3.3e-81 305.1 162 100.0
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 7.9e-35 151.0 157 55.4
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.5e-28 130.2 167 44.9
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 3.2e-28 129.0 161 47.2
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 9.4e-28 127.5 158 46.2
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 6.7e-26 121.3 161 46.6
Sed0000802 Sechium edule HOM05D008070 ORTHO05D001888 2.8e-24 115.9 138 44.2
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 3.1e-23 112.5 173 41.0
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 2.7e-22 109.4 164 39.6
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 1.7e-21 106.7 158 39.2
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 2.9e-21 105.9 156 37.2
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 3.8e-21 105.5 136 41.9
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 2.1e-19 99.8 162 36.4
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 2.1e-19 99.8 162 36.4
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 3.6e-19 99.0 135 40.7
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 3.6e-19 99.0 135 40.0
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 1.8e-18 96.7 135 40.7
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 5.2e-18 95.1 168 33.9
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 5.7e-17 91.7 157 33.8
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 5.7e-17 91.7 157 33.8
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 5.7e-17 91.7 157 33.8
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 5.7e-17 91.7 157 33.8
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 5.7e-17 91.7 145 37.2
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 9.8e-17 90.9 154 35.7
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 2.2e-16 89.7 158 38.0
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 3.7e-16 89.0 157 35.7
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 3.7e-16 89.0 151 35.1
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 8.3e-16 87.8 137 36.5
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 8.3e-16 87.8 164 34.8
Prupe.1G249100 Prunus persica HOM05D008070 ORTHO05D001888 8.3e-16 87.8 160 34.4
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 1.8e-15 86.7 163 34.4
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 4.1e-15 85.5 161 35.4
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 4.1e-15 85.5 158 34.8
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 7.0e-15 84.7 157 34.4
QL04p082804 Quercus lobata HOM05D010056 ORTHO05D001888 7.0e-15 84.7 155 36.8
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 7.0e-15 84.7 160 35.6
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 2.0e-14 83.2 156 34.0
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 3.5e-14 82.4 151 33.1
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 4.5e-14 82.0 162 32.7
CARHR063750 Cardamine hirsuta HOM05D008070 ORTHO05D001888 5.9e-14 81.6 136 36.8
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 7.7e-14 81.3 165 33.3
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 1.0e-13 80.9 137 35.8
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 1.3e-13 80.5 136 33.8
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 1.7e-13 80.1 137 33.6
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 2.2e-13 79.7 137 34.3
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 2.2e-13 79.7 157 34.4
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 2.2e-13 79.7 157 34.4
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 2.2e-13 79.7 157 34.4
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 2.2e-13 79.7 157 32.5
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 5.0e-13 78.6 124 33.1
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 1.1e-12 77.4 157 34.4
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 1.9e-12 76.6 157 33.8
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 2.5e-12 76.3 149 33.6
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 3.2e-12 75.9 128 32.0
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 5.5e-12 75.1 149 32.9
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 7.2e-12 74.7 137 32.8
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 7.2e-12 74.7 149 33.6
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 9.5e-12 74.3 155 32.3
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 3.6e-11 72.4 157 29.9
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 4.7e-11 72.0 158 32.3
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 1.8e-10 70.1 162 30.2
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 1.8e-10 70.1 162 30.2
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 2.3e-10 69.7 136 31.6
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 2.3e-10 69.7 136 31.6
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 3.0e-10 69.3 136 30.1
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 3.0e-10 69.3 144 33.3
Aa31LG4G10410 Aethionema arabicum HOM05D008070 ORTHO05D001888 4.0e-10 68.9 163 27.6
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 1.5e-09 67.0 152 30.9
QL04p082907 Quercus lobata HOM05D010056 ORTHO05D001888 1.5e-09 67.0 153 28.1
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.0e-09 66.6 155 30.3
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 2.0e-09 66.6 128 37.5
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 2.6e-09 66.2 155 29.7
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 4.4e-09 65.5 152 31.6
QL04p083524 Quercus lobata HOM05D010056 ORTHO05D001888 9.8e-09 64.3 155 32.3
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.7e-08 63.5 151 27.8
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 2.8e-08 62.8 165 29.1
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 3.7e-08 62.4 160 30.6
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 6.3e-08 61.6 163 32.5
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 8.3e-08 61.2 163 32.5
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 8.3e-08 61.2 163 32.5
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 8.3e-08 61.2 163 32.5
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 1.4e-07 60.5 156 27.6
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.8e-07 60.1 154 27.3
DCAR_023403 Daucus carota HOM05D009745 ORTHO05D011350 1.8e-07 60.1 163 27.0
QL05p047697 Quercus lobata HOM05D010056 ORTHO05D001888 1.8e-07 60.1 155 27.7
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 3.1e-07 59.3 129 31.0
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 4.1e-07 58.9 165 30.3
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 7.0e-07 58.2 162 29.0
QL05p047683 Quercus lobata HOM05D010056 ORTHO05D001888 7.0e-07 58.2 155 26.5
CiPaw.07G124300 Carya illinoinensis HOM05D000036 ORTHO05D000441 9.2e-07 57.8 132 31.8
QL05p047917 Quercus lobata HOM05D010056 ORTHO05D001888 9.2e-07 57.8 155 26.5
Eucgr.H01005 Eucalyptus grandis HOM05D005742 ORTHO05D001888 1.2e-06 57.4 145 29.0
QL04p078865 Quercus lobata HOM05D010056 ORTHO05D001888 1.2e-06 57.4 157 29.9
Haze_05131 Corylus avellana HOM05D000036 ORTHO05D000441 1.6e-06 57.0 130 29.2
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.6e-06 57.0 141 29.8
QL04p078461 Quercus lobata HOM05D010056 ORTHO05D001888 7.7e-06 54.7 154 26.0


User provided reference genes

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