Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 4.9e-97 357.8 185 100.0
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.9e-64 249.6 193 73.6
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 3.0e-62 242.3 193 70.5
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.1e-59 233.8 193 68.4
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.0e-41 174.1 187 54.5
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 4.6e-39 165.2 175 53.7
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.4e-38 163.7 174 53.4
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 2.3e-38 162.9 179 52.5
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 9.7e-37 157.5 184 50.0
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 6.3e-36 154.8 177 46.3
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.0e-34 149.8 174 46.0
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.9e-33 146.0 191 44.0
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 8.5e-33 144.4 185 45.9
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.4e-32 143.7 184 44.6
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.5e-32 142.9 180 44.4
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.2e-32 142.1 194 44.8
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.5e-32 141.7 184 44.0
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 7.2e-32 141.4 175 44.6
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.2e-31 140.6 182 45.6
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.6e-31 140.2 176 44.9
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.1e-31 139.8 179 45.3
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 2.1e-31 139.8 192 42.7
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 3.6e-31 139.0 195 43.1
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 6.1e-31 138.3 195 42.1
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.4e-30 137.1 180 50.6
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.4e-30 137.1 180 43.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.8e-30 136.7 180 46.1
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 3.0e-30 136.0 172 44.8
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.0e-30 136.0 184 44.0
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.9e-30 135.6 180 45.0
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.7e-30 134.8 177 49.7
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 6.7e-30 134.8 185 41.6
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 6.7e-30 134.8 172 45.3
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.1e-29 134.0 177 45.2
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.5e-29 133.7 180 44.4
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.5e-29 133.7 192 39.1
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.5e-29 133.7 184 45.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.5e-29 133.7 177 44.6
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.3e-29 132.5 175 45.1
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 3.3e-29 132.5 208 40.9
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 3.3e-29 132.5 177 47.5
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 7.4e-29 131.3 174 43.1
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 7.4e-29 131.3 183 45.9
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.7e-28 130.2 189 40.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.7e-28 130.2 173 42.8
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 2.2e-28 129.8 184 41.8
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 3.7e-28 129.0 191 41.4
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 6.3e-28 128.3 178 42.1
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.8e-27 126.7 189 41.3
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.4e-27 126.3 178 42.1
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 2.4e-27 126.3 184 42.4
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 3.1e-27 125.9 188 41.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.1e-27 125.9 181 44.8
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.1e-27 125.6 188 40.4
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.3e-27 125.2 178 40.4
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 9.1e-27 124.4 177 43.5
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 9.1e-27 124.4 177 43.5
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 9.1e-27 124.4 180 45.6
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.2e-26 124.0 201 39.3
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.2e-26 124.0 173 43.9
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.6e-26 123.6 178 44.4
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 3.5e-26 122.5 178 47.8
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 7.7e-26 121.3 177 42.9
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.0e-25 120.9 179 42.5
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.3e-25 120.6 182 42.3
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.3e-25 120.6 171 43.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.7e-25 120.2 172 42.4
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.7e-25 120.2 184 41.3
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.7e-25 120.2 176 44.3
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.9e-25 119.4 179 41.9
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 2.9e-25 119.4 192 40.6
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 3.8e-25 119.0 200 40.5
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 3.8e-25 119.0 182 43.4
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 5.0e-25 118.6 192 35.9
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 8.5e-25 117.9 177 42.4
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 8.5e-25 117.9 177 42.4
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-24 117.1 182 41.2
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.9e-24 116.7 178 39.9
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.9e-24 116.7 179 41.9
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.2e-24 115.9 183 41.5
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 3.2e-24 115.9 177 43.5
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 3.2e-24 115.9 174 40.8
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 5.5e-24 115.2 175 38.9
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 7.2e-24 114.8 183 41.5
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 9.4e-24 114.4 183 41.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.2e-23 114.0 170 40.0
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.6e-23 113.6 187 39.6
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.1e-23 113.2 176 37.5
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.6e-23 112.5 173 39.9
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 3.6e-23 112.5 171 41.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 3.6e-23 112.5 175 38.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 6.1e-23 111.7 175 38.3
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 8.0e-23 111.3 175 41.1
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 1.0e-22 110.9 179 36.9
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.8e-22 110.2 135 46.7
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.0e-22 109.4 172 39.5
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 5.2e-22 108.6 171 36.8
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 6.7e-22 108.2 176 40.3
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 8.8e-22 107.8 181 39.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.5e-21 107.1 178 37.1
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.6e-21 106.3 175 39.4
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.4e-21 105.5 214 35.5
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 7.5e-21 104.8 175 41.7
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 7.5e-21 104.8 161 42.2
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 9.7e-21 104.4 177 34.5
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.7e-20 103.6 202 33.7
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.7e-20 103.6 172 39.0
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.2e-20 103.2 173 36.4
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 8.2e-20 101.3 175 38.9
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 4.1e-19 99.0 179 39.7
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 5.3e-19 98.6 177 40.1
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 9.1e-19 97.8 133 41.4
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 2.7e-18 96.3 176 29.5
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 4.5e-18 95.5 171 32.7
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 8.5e-17 91.3 210 35.2
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.5e-16 90.5 174 35.6
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.9e-16 90.1 176 30.1
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.2e-15 87.4 157 35.0
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 2.1e-15 86.7 172 32.0
Sed0020492 Sechium edule HOM05D005478 ORTHO05D006426 3.6e-15 85.9 73 68.5
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.7e-12 77.0 169 31.4
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 7.7e-10 68.2 176 29.5
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 5.0e-09 65.5 124 37.1
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 6.5e-09 65.1 54 61.1
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 1.9e-08 63.5 172 26.2
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 5.5e-08 62.0 126 38.1
SHI03806 Sapria himalayana HOM05D005478 ORTHO05D006426 9.5e-08 61.2 136 36.0
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.8e-07 59.7 84 40.5
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 4.7e-07 58.9 153 27.5
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 6.1e-07 58.5 93 35.5
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.0e-06 57.8 121 33.1
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.3e-06 56.6 105 37.1


User provided reference genes

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