Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 1.0e-45 186.4 95 100.0
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.6e-38 161.8 95 90.5
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.0e-37 159.8 95 88.4
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 3.8e-37 157.9 95 86.3
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.2e-32 142.1 96 76.0
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 6.3e-32 140.6 96 75.0
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 2.4e-31 138.7 96 74.0
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 3.1e-31 138.3 95 71.6
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 5.3e-31 137.5 96 72.9
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 7.0e-31 137.1 95 71.6
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 7.0e-31 137.1 92 73.9
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 9.1e-31 136.7 95 70.5
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 9.1e-31 136.7 95 72.6
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 1.2e-30 136.3 95 74.7
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 1.6e-30 136.0 95 75.8
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 1.6e-30 136.0 95 73.7
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 2.0e-30 135.6 95 73.7
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 5.9e-30 134.0 95 72.6
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 7.7e-30 133.7 95 73.7
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 7.7e-30 133.7 95 73.7
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 1.3e-29 132.9 95 72.6
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 1.7e-29 132.5 95 69.5
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 3.8e-29 131.3 93 74.2
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 5.0e-29 131.0 95 72.6
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.0e-29 131.0 95 69.5
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 6.5e-29 130.6 95 68.4
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 6.5e-29 130.6 95 68.4
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 2.5e-28 128.6 95 67.4
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.5e-28 127.5 95 65.3
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 5.5e-28 127.5 95 70.5
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.2e-28 127.1 95 66.3
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.2e-27 126.3 95 67.4
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.6e-27 125.9 95 64.2
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.6e-27 125.9 95 64.2
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 2.1e-27 125.6 95 65.3
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 4.7e-27 124.4 95 67.4
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 4.7e-27 124.4 95 68.4
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 1.0e-26 123.2 97 66.0
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 1.4e-26 122.9 95 65.3
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.8e-26 122.5 95 63.2
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 3.0e-26 121.7 97 69.1
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 4.0e-26 121.3 91 67.0
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 4.0e-26 121.3 95 66.3
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 4.0e-26 121.3 95 63.2
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 4.0e-26 121.3 96 65.6
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 6.7e-26 120.6 96 65.6
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 6.7e-26 120.6 95 64.2
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 6.7e-26 120.6 86 66.3
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 2.6e-25 118.6 95 65.3
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 4.4e-25 117.9 102 66.7
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 5.7e-25 117.5 102 63.7
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 1.3e-24 116.3 96 63.5
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 1.7e-24 115.9 96 63.5
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 1.7e-24 115.9 102 62.7
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 2.2e-24 115.5 94 67.0
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 2.2e-24 115.5 85 63.5
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.7e-24 114.8 101 60.4
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 8.2e-24 113.6 101 61.4
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.1e-23 113.2 92 65.2
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 1.1e-23 113.2 97 63.9
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.4e-23 112.8 94 63.8
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 4.1e-23 111.3 103 60.2
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 4.1e-23 111.3 102 62.7
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 4.1e-23 111.3 95 60.0
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 4.1e-23 111.3 95 60.0
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 5.3e-23 110.9 92 63.0
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.3e-23 110.9 95 60.0
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 5.3e-23 110.9 104 62.5
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 5.3e-23 110.9 105 60.0
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 7.0e-23 110.5 94 66.0
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.2e-22 109.8 103 60.2
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 1.2e-22 109.8 104 59.6
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 1.6e-22 109.4 102 58.8
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 1.6e-22 109.4 97 60.8
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 2.0e-22 109.0 100 59.0
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 2.0e-22 109.0 105 58.1
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 2.0e-22 109.0 104 59.6
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.7e-22 108.6 100 55.0
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 2.7e-22 108.6 75 69.3
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 4.5e-22 107.8 102 58.8
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 5.9e-22 107.5 95 61.1
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 5.9e-22 107.5 101 56.4
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 5.9e-22 107.5 106 58.5
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 7.7e-22 107.1 83 63.9
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 7.7e-22 107.1 95 63.2
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 7.7e-22 107.1 102 59.8
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.3e-21 106.3 107 56.1
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 1.7e-21 105.9 105 56.2
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.7e-21 105.9 102 58.8
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 2.2e-21 105.5 103 60.2
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.9e-21 105.1 96 59.4
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 3.8e-21 104.8 105 58.1
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 3.8e-21 104.8 105 58.1
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 6.5e-21 104.0 93 60.2
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 8.5e-21 103.6 101 56.4
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 8.5e-21 103.6 95 58.9
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 8.5e-21 103.6 105 56.2
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.1e-20 103.2 96 59.4
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 1.1e-20 103.2 105 55.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 1.5e-20 102.8 102 55.9
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 1.9e-20 102.4 95 57.9
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 2.5e-20 102.1 105 55.2
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.5e-20 102.1 86 58.1
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 2.5e-20 102.1 102 60.8
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 3.2e-20 101.7 106 52.8
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 3.2e-20 101.7 102 56.9
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 5.5e-20 100.9 96 60.4
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 7.2e-20 100.5 104 54.8
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 7.2e-20 100.5 71 67.6
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 7.2e-20 100.5 95 57.9
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 7.2e-20 100.5 104 54.8
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 9.4e-20 100.1 105 57.1
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.6e-19 99.4 96 57.3
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.6e-19 99.4 105 56.2
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 2.1e-19 99.0 76 61.8
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.1e-19 99.0 96 58.3
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 4.7e-19 97.8 95 56.8
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 4.7e-19 97.8 95 58.9
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 6.1e-19 97.4 102 56.9
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 6.1e-19 97.4 107 54.2
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 8.0e-19 97.1 97 56.7
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 8.0e-19 97.1 106 55.7
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.0e-18 96.7 96 57.3
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.8e-18 95.9 72 66.7
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.8e-18 95.9 96 56.2
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.8e-18 95.9 96 55.2
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 2.3e-18 95.5 96 59.4
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 2.3e-18 95.5 83 60.2
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.0e-18 95.1 96 54.2
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 5.2e-18 94.4 96 55.2
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 5.2e-18 94.4 97 55.7
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 5.2e-18 94.4 97 55.7
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 6.8e-18 94.0 96 56.2
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 6.8e-18 94.0 96 57.3
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 6.8e-18 94.0 68 72.1
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-17 93.2 97 55.7
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.2e-17 93.2 97 55.7
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.2e-17 93.2 97 55.7
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.5e-17 92.8 105 55.2
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.5e-17 92.8 98 55.1
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 2.0e-17 92.4 97 55.7
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 2.0e-17 92.4 97 55.7
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 2.6e-17 92.0 96 55.2
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 4.4e-17 91.3 96 53.1
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 4.4e-17 91.3 97 55.7
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 4.4e-17 91.3 96 55.2
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 5.7e-17 90.9 84 59.5
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 7.5e-17 90.5 97 53.6
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 9.8e-17 90.1 97 53.6
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 9.8e-17 90.1 97 53.6
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 9.8e-17 90.1 102 54.9
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-16 89.7 96 54.2
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 1.7e-16 89.4 97 53.6
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 1.7e-16 89.4 97 53.6
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 1.7e-16 89.4 97 53.6
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 1.7e-16 89.4 98 55.1
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 4.8e-16 87.8 100 53.0
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 6.3e-16 87.4 99 54.5
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 6.3e-16 87.4 101 51.5
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 6.3e-16 87.4 74 52.7
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 1.4e-15 86.3 103 51.5
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 1.4e-15 86.3 97 52.6
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.4e-15 86.3 82 58.5
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.4e-15 86.3 97 52.6
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.8e-15 85.9 82 58.5
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.8e-15 85.9 82 58.5
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 1.8e-15 85.9 99 56.6
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 3.1e-15 85.1 70 64.3
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 7.0e-15 84.0 86 52.3
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 1.6e-14 82.8 97 51.5
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 1.6e-14 82.8 97 51.5
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-13 80.1 82 56.1
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-13 80.1 82 56.1
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.0e-13 80.1 105 49.5
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 1.3e-13 79.7 75 58.7
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 1.7e-13 79.3 82 54.9
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 4.2e-12 74.7 84 47.6
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 4.2e-12 74.7 79 55.7
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 4.2e-12 74.7 86 48.8
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.0e-10 70.1 81 49.4
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 5.2e-10 67.8 83 50.6
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 2.0e-09 65.9 88 42.0
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 2.6e-09 65.5 83 49.4
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 3.4e-09 65.1 85 49.4
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 1.7e-08 62.8 70 48.6


User provided reference genes

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