Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 7.6e-214 746.9 377 100.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 5.5e-180 634.4 377 86.7
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.6e-155 553.1 377 74.3
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 8.0e-155 550.8 377 74.0
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.0e-154 550.4 378 73.3
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.0e-154 550.4 378 73.3
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.8e-154 549.7 377 73.7
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.5e-153 546.6 378 72.8
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 2.9e-152 542.3 377 73.7
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.4e-151 540.0 377 74.0
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 2.4e-151 539.3 377 74.5
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 6.6e-149 531.2 377 73.2
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 8.6e-149 530.8 379 71.5
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 8.6e-149 530.8 379 71.5
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 8.6e-149 530.8 378 73.3
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 1.2e-147 526.9 379 71.5
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 2.8e-147 525.8 360 75.6
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.6e-147 525.4 411 67.6
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 4.7e-147 525.0 379 71.2
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 4.7e-147 525.0 379 72.3
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 1.0e-146 523.9 379 71.5
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.4e-146 523.5 378 72.0
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.8e-146 523.1 379 70.7
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 4.0e-146 521.9 380 71.1
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 8.9e-146 520.8 380 71.3
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 2.0e-145 519.6 377 70.8
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 2.0e-145 519.6 377 70.8
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 2.6e-145 519.2 379 70.4
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.4e-145 518.8 380 71.3
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 5.8e-145 518.1 377 71.1
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.7e-144 516.5 377 69.8
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 2.2e-144 516.2 378 70.6
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.9e-144 515.8 377 70.8
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 2.9e-144 515.8 377 70.8
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 8.3e-144 514.2 370 70.8
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 8.3e-144 514.2 377 69.8
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.1e-143 513.8 367 70.0
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 2.4e-143 512.7 370 70.5
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 3.2e-143 512.3 377 70.0
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 3.2e-143 512.3 380 68.9
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.2e-143 512.3 377 70.0
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 4.1e-143 511.9 377 69.0
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 4.1e-143 511.9 378 69.3
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.2e-142 510.4 379 70.7
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.6e-142 510.0 378 69.8
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.6e-142 510.0 380 70.8
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 6.0e-142 508.1 377 69.0
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 7.8e-142 507.7 377 68.7
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.0e-141 505.0 379 70.2
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 6.6e-141 504.6 377 67.9
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 6.6e-141 504.6 381 70.1
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.5e-140 503.4 376 68.6
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.2e-139 500.4 378 68.0
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.6e-139 500.0 405 66.4
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.1e-139 499.6 379 69.4
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 3.6e-139 498.8 379 67.5
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 3.6e-139 498.8 379 68.3
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 7.5e-137 491.1 363 67.5
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 4.9e-136 488.4 343 71.1
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.1e-131 473.0 377 63.7
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 3.6e-131 472.2 348 68.7
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 4.7e-131 471.9 413 64.2
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.4e-130 470.3 379 65.2
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 2.3e-130 469.5 379 64.9
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.7e-128 463.4 361 64.3
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 4.9e-128 461.8 365 64.7
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.1e-127 458.8 374 65.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 5.6e-124 448.4 376 63.0
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 8.1e-123 444.5 399 65.2
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 1.1e-122 444.1 366 61.5
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 3.2e-119 432.6 377 57.8
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.3e-117 427.2 337 67.1
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.3e-116 422.5 374 57.5
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.6e-115 420.2 400 59.5
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 6.9e-114 414.8 361 57.1
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 6.4e-112 408.3 342 63.2
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.9e-111 406.8 342 63.5
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 5.4e-111 405.2 366 57.9
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.7e-109 400.2 371 56.6
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.6e-108 395.2 384 57.8
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.1e-107 393.3 269 75.1
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 6.2e-107 391.7 396 56.8
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.1e-106 391.0 321 61.4
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 4.2e-103 379.0 362 58.0
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 6.0e-102 375.2 397 51.9
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 7.6e-97 358.2 280 67.1
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-95 353.2 383 54.8
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.9e-87 327.0 371 53.6
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 6.1e-86 322.0 332 51.2
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 5.3e-82 308.9 339 44.0
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 2.2e-75 287.0 168 79.8
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 2.4e-74 283.5 266 55.6
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.2e-73 281.2 170 80.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 6.5e-72 275.4 175 77.7
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 4.2e-71 272.7 194 72.7
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 5.5e-71 272.3 175 77.7
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.5e-68 264.2 174 74.7
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 2.8e-67 260.0 175 76.6
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.0e-64 251.5 176 69.9
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.5e-63 247.7 258 52.7
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 3.0e-61 240.0 180 62.8
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 9.7e-60 235.0 327 40.1
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.1e-58 229.6 198 63.6
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 8.0e-54 215.3 172 64.0
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.0e-53 213.0 158 66.5
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 9.8e-52 208.4 123 77.2
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.1e-46 190.7 107 82.2
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 7.5e-44 182.2 111 75.7
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 3.5e-41 173.3 131 66.4
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 3.8e-40 169.9 111 70.3
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.0e-37 161.8 232 45.7
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-37 161.4 139 62.6
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.2e-36 158.3 349 31.5
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 2.6e-36 157.1 100 78.0
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 1.3e-35 154.8 123 62.6
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.3e-35 154.8 100 73.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 2.0e-33 147.5 94 69.1
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 4.3e-31 139.8 133 56.4
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-29 134.4 102 65.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 8.9e-29 132.1 101 68.3
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-26 125.2 75 74.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 5.0e-24 116.3 82 72.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.6e-22 110.2 71 73.2
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 4.7e-22 109.8 118 54.2
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 1.5e-20 104.8 121 41.3
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 7.5e-20 102.4 205 32.2
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.9e-19 100.5 73 67.1
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 4.1e-18 96.7 79 63.3
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 2.0e-12 77.8 358 25.1
Duzib147G0944 Durio zibethinus HOM05D006555 ORTHO05D008376 2.4e-10 70.9 329 24.6
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 5.4e-10 69.7 373 24.7
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 1.2e-09 68.6 330 23.6
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 5.1e-08 63.2 52 59.6
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.5e-07 61.6 254 24.8
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.5e-07 61.6 254 24.8
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 3.6e-06 57.0 127 28.3


User provided reference genes

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