Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 1.1e-46 189.5 91 100.0
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 6.9e-44 180.3 101 89.1
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 6.9e-44 180.3 101 89.1
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 9.9e-43 176.4 101 87.1
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 3.8e-42 174.5 101 86.1
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 3.8e-42 174.5 101 85.1
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 8.4e-42 173.3 101 85.1
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 8.4e-42 173.3 101 85.1
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 8.4e-42 173.3 101 85.1
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 1.9e-41 172.2 101 85.1
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 2.4e-41 171.8 101 84.2
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 7.1e-41 170.2 101 84.2
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 7.1e-41 170.2 101 84.2
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 7.1e-41 170.2 101 84.2
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 7.1e-41 170.2 101 84.2
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 7.1e-41 170.2 101 84.2
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 9.3e-41 169.9 101 84.2
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-40 169.5 101 84.2
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 2.1e-40 168.7 101 83.2
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 2.1e-40 168.7 101 83.2
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 2.1e-40 168.7 101 84.2
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 4.6e-40 167.5 101 83.2
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 7.9e-40 166.8 101 83.2
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.3e-39 166.0 99 84.8
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.3e-39 166.0 99 84.8
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.3e-39 166.0 99 84.8
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 5.1e-39 164.1 101 82.2
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 8.7e-39 163.3 101 82.2
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 8.7e-39 163.3 101 81.2
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-38 162.2 101 81.2
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 2.5e-38 161.8 101 81.2
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-37 157.5 97 80.4
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 8.1e-37 156.8 99 79.8
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 8.1e-37 156.8 101 79.2
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 1.1e-36 156.4 98 80.6
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 9.0e-36 153.3 94 81.9
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 9.0e-36 153.3 101 76.2
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 7.6e-35 150.2 88 83.0
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 1.3e-34 149.4 101 78.2
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.2e-34 148.7 101 74.3
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 2.2e-34 148.7 101 77.2
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 8.4e-34 146.7 100 77.0
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 1.1e-33 146.4 101 73.3
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 4.2e-33 144.4 86 84.9
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 9.3e-33 143.3 101 73.3
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.1e-32 142.1 86 83.7
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 2.1e-32 142.1 99 73.7
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 7.9e-32 140.2 66 95.5
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 3.0e-31 138.3 86 81.4
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 8.7e-31 136.7 101 69.3
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 2.5e-30 135.2 68 89.7
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 1.6e-29 132.5 66 93.9
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 2.1e-29 132.1 94 70.2
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 6.2e-29 130.6 93 73.1
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 4.0e-28 127.9 66 89.4
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 4.9e-26 120.9 56 98.2
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.1e-25 119.8 79 78.5
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 5.5e-25 117.5 99 59.6
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 1.6e-24 115.9 76 77.6
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 2.2e-21 105.5 73 72.6
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.4e-20 102.1 72 73.6
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 2.6e-19 98.6 48 91.7
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 2.2e-18 95.5 81 71.6
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 5.5e-17 90.9 65 75.4
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 7.2e-17 90.5 48 87.5
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 3.6e-16 88.2 66 74.2
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 8.8e-15 83.6 53 75.5
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 1.9e-14 82.4 87 55.2
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 1.8e-12 75.9 57 71.9
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 1.5e-11 72.8 36 86.1
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-08 61.2 27 96.3
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 1.0e-07 60.1 27 96.3
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 1.8e-07 59.3 93 40.9
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 3.9e-07 58.2 51 66.7
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 8.8e-07 57.0 51 64.7
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 1.1e-06 56.6 56 48.2
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 1.5e-06 56.2 56 48.2
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 1.5e-06 56.2 69 43.5
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 2.6e-06 55.5 56 46.4
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 2.6e-06 55.5 75 37.3
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 4.4e-06 54.7 56 46.4
CiPaw.13G036200 Carya illinoinensis HOM05D007099 ORTHO05D009081 7.4e-06 53.9 56 46.4
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 7.4e-06 53.9 65 44.6
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 7.4e-06 53.9 65 44.6
Cc11_g04750 Coffea canephora HOM05D007099 ORTHO05D009081 7.4e-06 53.9 56 48.2
Nitab4.5_0001478g0230 Nicotiana tabacum HOM05D000388 ORTHO05D009977 9.7e-06 53.5 27 81.5


User provided reference genes

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