Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 7.4e-228 793.5 393 100.0
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.6e-188 662.1 394 83.5
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 2.1e-182 642.5 394 82.2
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 6.2e-158 561.2 388 69.1
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.8e-157 559.7 388 70.1
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 2.9e-155 552.4 388 69.1
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 3.8e-155 552.0 392 68.1
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 6.4e-155 551.2 394 68.3
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 1.4e-154 550.1 388 67.0
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 7.1e-154 547.7 393 67.9
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 1.2e-153 547.0 391 68.8
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.6e-153 546.6 388 67.3
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.7e-153 545.8 388 67.0
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 1.3e-152 543.5 394 65.5
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.7e-152 543.1 388 66.8
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 5.1e-152 541.6 388 67.3
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 6.6e-152 541.2 393 68.4
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 6.6e-152 541.2 391 66.0
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 8.6e-152 540.8 388 67.3
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 1.1e-151 540.4 392 66.8
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 4.3e-151 538.5 425 63.5
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 2.1e-150 536.2 391 66.2
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 2.8e-150 535.8 388 64.9
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 3.6e-150 535.4 392 66.6
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 6.2e-150 534.6 388 66.5
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 8.1e-150 534.3 391 67.0
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 1.1e-149 533.9 388 66.2
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 1.4e-149 533.5 405 64.2
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 1.8e-149 533.1 388 66.2
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 5.2e-149 531.6 391 65.0
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 6.9e-149 531.2 388 65.5
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 3.4e-148 528.9 448 60.5
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 1.3e-147 526.9 391 65.7
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 1.3e-147 526.9 391 65.7
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 2.4e-146 522.7 388 64.7
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.6e-145 520.0 388 64.4
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 2.7e-145 519.2 392 64.0
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 2.7e-145 519.2 391 63.2
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 4.6e-145 518.5 393 62.3
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 7.8e-145 517.7 378 66.1
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 7.8e-145 517.7 388 63.7
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 1.3e-144 516.9 391 63.9
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 3.9e-144 515.4 392 65.6
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 1.5e-143 513.5 393 63.9
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 2.5e-143 512.7 391 63.9
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 4.3e-143 511.9 393 63.4
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 5.6e-143 511.5 391 63.7
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 5.6e-143 511.5 392 63.0
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 5.6e-143 511.5 390 64.4
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 5.6e-143 511.5 392 63.8
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 7.3e-143 511.1 391 63.7
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.3e-142 510.4 391 64.5
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 2.1e-142 509.6 394 64.7
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.8e-142 509.2 414 61.8
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 3.6e-142 508.8 393 63.6
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 3.6e-142 508.8 391 63.7
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 4.8e-142 508.4 413 62.0
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 1.4e-141 506.9 393 62.6
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 1.8e-141 506.5 393 63.4
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 4.0e-141 505.4 388 64.7
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 5.3e-141 505.0 386 62.7
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.0e-140 503.1 423 59.1
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 2.6e-140 502.7 391 62.4
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 3.4e-140 502.3 391 62.7
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 7.6e-140 501.1 468 57.1
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.3e-139 500.4 407 61.2
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 2.2e-139 499.6 394 61.9
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 3.8e-139 498.8 391 62.4
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 3.8e-139 498.8 385 61.6
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 4.9e-139 498.4 391 62.9
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 6.4e-139 498.0 393 62.6
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.1e-138 497.3 423 59.1
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 7.1e-138 494.6 392 61.7
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 7.1e-138 494.6 367 67.0
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 4.3e-135 485.3 356 65.7
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.4e-133 480.3 378 62.4
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 2.9e-131 472.6 392 60.5
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 3.2e-130 469.2 393 60.8
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 1.8e-128 463.4 394 58.1
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 1.4e-125 453.8 503 49.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 1.3e-123 447.2 382 59.7
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 2.9e-123 446.0 442 53.4
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.6e-121 440.3 357 61.6
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.9e-119 433.3 330 63.0
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 1.2e-116 424.1 387 54.5
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 2.2e-115 419.9 432 52.3
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 1.2e-113 414.1 350 56.9
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 8.2e-110 401.4 391 52.9
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 3.1e-109 399.4 313 62.0
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 8.2e-102 374.8 283 63.3
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 5.3e-101 372.1 272 65.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 6.9e-101 371.7 355 52.7
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.0e-99 367.9 292 62.0
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 2.2e-99 366.7 398 48.2
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 5.2e-96 355.5 400 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 6.7e-96 355.1 399 47.6
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 6.5e-91 338.6 394 45.9
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 9.4e-90 334.7 247 66.4
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 6.5e-83 312.0 232 65.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 7.5e-79 298.5 217 65.4
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 6.3e-78 295.4 293 51.5
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 1.0e-75 288.1 229 62.0
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 5.5e-74 282.3 482 37.1
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 1.6e-68 264.2 370 40.0
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 1.1e-66 258.1 199 62.8
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 1.2e-57 228.0 320 37.5
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 8.6e-51 205.3 139 68.3
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 6.2e-41 172.6 535 26.2
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 2.6e-39 167.2 130 63.8
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 3.3e-34 150.2 109 67.9
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.6e-31 139.0 116 60.3
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.7e-30 137.9 116 59.5
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.7e-30 137.9 116 59.5
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.7e-30 137.9 116 59.5
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.9e-30 137.1 116 59.5
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 3.8e-30 136.7 80 80.0
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.4e-30 135.6 116 58.6
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.1e-29 135.2 106 58.5
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.4e-29 134.0 106 58.5
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.6e-28 131.3 106 56.6
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 7.8e-28 129.0 104 55.8
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 1.3e-27 128.3 79 74.7
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 2.0e-23 114.4 171 38.0
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.4e-23 113.6 73 69.9
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 7.6e-23 112.5 109 56.0
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 2.9e-22 110.5 185 33.0
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-21 108.6 71 69.0
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 1.6e-20 104.8 268 32.1
PRCOL_00001496 Prasinoderma coloniale HOM05D002536 ORTHO05D006290 4.6e-20 103.2 289 26.3
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 8.7e-19 99.0 60 76.7
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-18 98.6 62 72.6
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.1e-18 98.6 62 72.6
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.3e-18 97.1 62 71.0
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 4.8e-17 93.2 124 41.9
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 1.4e-16 91.7 69 62.3
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.1e-16 90.5 62 69.4
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.1e-16 90.5 62 69.4
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 7.6e-15 85.9 71 53.5
ClCG05G010860 Citrullus lanatus HOM05D002536 ORTHO05D006290 1.1e-13 82.0 47 85.1
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 7.1e-13 79.3 53 71.7
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 9.3e-13 79.0 106 38.7
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 7.9e-12 75.9 65 61.5
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 9.6e-10 68.9 71 45.1
TPR.G25728 Trifolium pratense HOM05D002536 ORTHO05D006290 3.4e-07 60.5 58 43.1
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.7e-06 58.2 34 79.4


User provided reference genes

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