Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021551 Sechium edule HOM05D002846 ORTHO05D002692 4.7e-99 364.8 218 100.0
CsaV3_7G003710 Cucumis sativus L. HOM05D002846 ORTHO05D002692 2.4e-26 123.2 152 56.6
MELO3C018808.2 Cucumis melo HOM05D002846 ORTHO05D002692 1.9e-23 113.6 122 61.5
ClCG02G001830 Citrullus lanatus HOM05D002846 ORTHO05D002692 2.7e-22 109.8 155 52.9
Lalb_Chr24g0393141 Lupinus albus HOM05D002846 ORTHO05D002692 7.5e-12 75.1 129 38.8
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 7.5e-12 75.1 115 42.6
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 9.7e-12 74.7 124 41.1
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.7e-11 73.9 121 40.5
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 4.8e-11 72.4 121 41.3
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 8.2e-11 71.6 116 38.8
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.8e-10 70.5 127 40.9
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 3.1e-10 69.7 117 40.2
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 3.1e-10 69.7 119 40.3
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 5.3e-10 68.9 119 37.8
Glyma.13G308000 Glycine max HOM05D002846 ORTHO05D002692 9.1e-10 68.2 117 37.6
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-09 67.8 112 40.2
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 2.7e-09 66.6 120 39.2
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 3.5e-09 66.2 118 37.3
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 3.5e-09 66.2 129 36.4
Dinv02736 Davidia involucrata HOM05D002846 ORTHO05D002692 4.5e-09 65.9 126 37.3
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 5.9e-09 65.5 128 39.1
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 5.9e-09 65.5 119 38.7
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 5.9e-09 65.5 128 37.5
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 7.7e-09 65.1 117 40.2
Lj1A758T10 Lonicera japonica HOM05D002846 ORTHO05D002692 1.0e-08 64.7 113 38.9
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 1.3e-08 64.3 117 40.2
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 1.3e-08 64.3 117 40.2
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 1.3e-08 64.3 119 37.8
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 1.7e-08 63.9 112 40.2
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 1.7e-08 63.9 118 40.7
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 1.7e-08 63.9 106 38.7
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.2e-08 63.5 123 39.8
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.2e-08 63.5 123 36.6
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 2.9e-08 63.2 118 38.1
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 2.9e-08 63.2 140 30.7
Oeu027251.1 Olea europaea HOM05D002846 ORTHO05D002692 2.9e-08 63.2 138 35.5
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 3.8e-08 62.8 167 29.3
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 6.5e-08 62.0 133 34.6
Actinidia09707 Actinidia chinensis HOM05D002846 ORTHO05D002692 8.5e-08 61.6 121 35.5
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 1.1e-07 61.2 124 38.7
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 1.1e-07 61.2 147 35.4
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.9e-07 60.5 124 38.7
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.9e-07 60.5 123 35.0
BcaC01g03489 Brassica carinata HOM05D002846 ORTHO05D002692 2.5e-07 60.1 129 34.1
A03p42420 Brassica napus HOM05D002846 ORTHO05D002692 2.5e-07 60.1 129 34.1
C03p51900 Brassica napus HOM05D002846 ORTHO05D002692 2.5e-07 60.1 129 34.1
BolC3t17475H Brassica oleracea HOM05D002846 ORTHO05D002692 2.5e-07 60.1 129 34.1
BraA03t13394Z Brassica rapa HOM05D002846 ORTHO05D002692 2.5e-07 60.1 129 34.1
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 2.5e-07 60.1 113 38.1
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 3.2e-07 59.7 113 41.6
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 3.2e-07 59.7 122 35.2
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 3.2e-07 59.7 122 35.2
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 4.2e-07 59.3 122 34.4
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 4.2e-07 59.3 151 33.8
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 4.2e-07 59.3 141 38.3
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 4.2e-07 59.3 136 36.0
BcaB04g19182 Brassica carinata HOM05D002846 ORTHO05D002692 7.2e-07 58.5 129 34.1
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 7.2e-07 58.5 130 33.1
Lsat_1_v5_gn_5_5060 Lactuca sativa HOM05D002846 ORTHO05D002692 9.4e-07 58.2 121 37.2
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.2e-06 57.8 130 36.2
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.6e-06 57.4 116 37.1
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.6e-06 57.4 153 32.0
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 1.6e-06 57.4 139 36.0
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.6e-06 57.4 109 35.8
Duzib268G1153 Durio zibethinus HOM05D002846 ORTHO05D002692 2.1e-06 57.0 101 37.6
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 2.1e-06 57.0 123 35.8
PGR042G0859 Punica granatum HOM05D002846 ORTHO05D002692 2.1e-06 57.0 131 34.4
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 2.1e-06 57.0 145 34.5
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 2.1e-06 57.0 125 35.2
A01p33250 Brassica napus HOM05D002846 ORTHO05D002692 2.7e-06 56.6 132 31.8
A05p27020 Brassica napus HOM05D002846 ORTHO05D002692 2.7e-06 56.6 129 33.3
BraA01t03443Z Brassica rapa HOM05D002846 ORTHO05D002692 2.7e-06 56.6 132 31.8
BraA05t21588Z Brassica rapa HOM05D002846 ORTHO05D002692 2.7e-06 56.6 129 33.3
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.7e-06 56.6 129 35.7
Oeu036754.1 Olea europaea HOM05D002846 ORTHO05D002692 2.7e-06 56.6 120 35.0
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 3.6e-06 56.2 132 34.1
Thhalv10021505m.g Eutrema salsugineum HOM05D002846 ORTHO05D002692 3.6e-06 56.2 105 37.1
AT3G21710 Arabidopsis thaliana HOM05D002846 ORTHO05D002692 4.7e-06 55.8 108 34.3
EL10Ac9g20666 Beta vulgaris HOM05D002846 ORTHO05D002692 4.7e-06 55.8 132 30.3
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 4.7e-06 55.8 105 38.1
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 4.7e-06 55.8 110 36.4
BolC1t04204H Brassica oleracea HOM05D002846 ORTHO05D002692 4.7e-06 55.8 107 33.6
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 4.7e-06 55.8 110 36.4
AUR62025052 Chenopodium quinoa HOM05D002846 ORTHO05D002692 4.7e-06 55.8 115 36.5
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 6.1e-06 55.5 115 38.3
BcaC09g49107 Brassica carinata HOM05D002846 ORTHO05D002692 8.0e-06 55.1 132 31.1
Rhsim06G0159700 Rhododendron simsii HOM05D002846 ORTHO05D002692 8.0e-06 55.1 142 33.1
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 8.0e-06 55.1 141 33.3


User provided reference genes

Program Settings