Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 9.9e-55 216.5 104 100.0
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.1e-48 196.4 102 93.1
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.4e-48 195.3 102 92.2
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.4e-47 191.4 102 90.2
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 2.5e-34 148.7 100 74.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 4.8e-33 144.4 100 75.0
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.1e-32 143.3 100 74.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 3.1e-32 141.7 97 69.1
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 6.9e-32 140.6 99 73.7
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.6e-31 137.1 99 70.7
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.6e-31 137.1 99 70.7
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 7.6e-31 137.1 99 70.7
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.3e-30 136.3 102 68.6
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.9e-30 135.2 100 69.0
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 4.9e-30 134.4 100 69.0
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 6.5e-30 134.0 99 69.7
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 6.5e-30 134.0 99 70.7
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 6.5e-30 134.0 99 70.7
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 8.4e-30 133.7 99 69.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 8.4e-30 133.7 99 65.7
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.1e-29 133.3 103 65.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 1.1e-29 133.3 100 69.0
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.4e-29 132.9 100 69.0
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.2e-29 131.3 100 68.0
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 5.5e-29 131.0 100 69.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 4.6e-28 127.9 101 66.3
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 6.0e-28 127.5 95 66.3
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 6.0e-28 127.5 96 66.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 7.9e-28 127.1 99 64.6
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 7.9e-28 127.1 101 66.3
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.0e-27 126.7 99 66.7
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.3e-27 126.3 103 61.2
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.3e-27 126.3 98 65.3
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.3e-27 126.3 99 63.6
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.8e-27 125.9 97 66.0
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.8e-27 125.9 101 62.4
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.3e-27 125.6 99 64.6
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 3.0e-27 125.2 102 67.6
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.9e-27 124.8 100 65.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 5.1e-27 124.4 99 65.7
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 5.1e-27 124.4 99 63.6
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.1e-26 123.2 99 64.6
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.1e-26 123.2 99 64.6
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.5e-26 122.9 100 63.0
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.9e-26 122.5 99 63.6
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.9e-26 122.5 101 65.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.5e-26 122.1 95 64.2
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 4.3e-26 121.3 98 63.3
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 4.3e-26 121.3 100 65.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 7.4e-26 120.6 98 63.3
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 7.4e-26 120.6 95 65.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 9.6e-26 120.2 99 62.6
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 1.6e-25 119.4 103 61.2
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 2.1e-25 119.0 96 67.7
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.8e-25 118.6 100 62.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 3.7e-25 118.2 95 63.2
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 3.7e-25 118.2 103 62.1
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 4.8e-25 117.9 98 61.2
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 6.2e-25 117.5 98 62.2
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.2e-25 117.1 100 60.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.2e-25 117.1 100 60.0
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 8.2e-25 117.1 104 59.6
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.8e-24 115.9 104 59.6
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 2.4e-24 115.5 100 61.0
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.4e-24 115.5 100 61.0
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 2.4e-24 115.5 102 67.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.4e-24 115.5 99 61.6
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 3.1e-24 115.2 104 58.7
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 6.9e-24 114.0 100 60.0
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 6.9e-24 114.0 100 60.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 6.9e-24 114.0 104 58.7
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 9.0e-24 113.6 102 65.7
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 2.0e-23 112.5 88 67.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 3.4e-23 111.7 104 62.5
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.8e-23 110.9 97 59.8
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 5.8e-23 110.9 99 55.6
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 1.3e-22 109.8 99 58.6
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.2e-22 109.0 95 61.1
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 3.8e-22 108.2 102 62.7
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 4.2e-21 104.8 100 57.0
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 5.5e-21 104.4 99 54.5
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 5.5e-21 104.4 100 57.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 5.5e-21 104.4 100 57.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 7.2e-21 104.0 100 57.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.6e-20 102.8 99 53.5
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.6e-20 102.8 97 56.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 4.6e-20 101.3 90 57.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 7.9e-20 100.5 100 55.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.0e-19 100.1 100 56.0
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 6.7e-19 97.4 98 56.1
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 5.7e-18 94.4 87 56.3
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.3e-17 93.2 79 58.2
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.8e-17 91.3 91 56.0
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 2.0e-15 85.9 76 60.5
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 7.7e-15 84.0 70 61.4
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 7.7e-15 84.0 98 46.9
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 5.5e-13 77.8 95 49.5
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.4e-11 73.2 81 51.9
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 2.2e-09 65.9 102 42.2
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 3.7e-09 65.1 63 55.6
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.7e-06 56.2 106 36.8


User provided reference genes

Program Settings