Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 4.0e-120 434.9 234 100.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.9e-85 319.7 235 72.8
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 2.4e-85 319.3 237 71.3
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.5e-74 283.5 211 70.6
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.1e-37 161.0 238 45.8
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 7.9e-36 154.8 215 44.7
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 8.8e-35 151.4 230 41.3
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.3e-34 149.4 230 40.9
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.7e-34 148.7 229 40.6
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 5.7e-34 148.7 230 40.9
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 2.2e-33 146.7 230 43.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.2e-33 146.7 222 43.2
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 8.2e-33 144.8 231 40.7
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 8.2e-33 144.8 227 41.9
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.2e-33 144.8 235 40.4
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.4e-32 144.1 237 41.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 2.4e-32 143.3 236 41.9
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 2.0e-31 140.2 238 39.1
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.6e-31 139.8 238 38.2
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 3.5e-31 139.4 222 39.6
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.5e-31 139.4 229 41.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 5.9e-31 138.7 238 42.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 5.9e-31 138.7 222 42.3
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 7.7e-31 138.3 237 40.5
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 5.0e-30 135.6 239 38.9
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 5.0e-30 135.6 239 38.9
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.5e-29 134.0 225 40.4
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 4.2e-29 132.5 219 39.3
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 9.4e-29 131.3 225 38.2
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.2e-28 131.0 234 36.8
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.6e-28 130.6 237 38.8
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 3.0e-27 126.3 203 41.9
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 5.2e-27 125.6 234 38.9
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 5.2e-27 125.6 213 38.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 8.8e-27 124.8 224 40.2
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.3e-26 122.9 217 38.7
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 3.3e-26 122.9 227 37.9
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.3e-25 120.9 244 36.1
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.3e-25 120.9 217 37.8
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.7e-25 120.6 250 34.0
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 6.3e-25 118.6 255 34.9
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.4e-24 117.5 256 36.7
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 2.4e-24 116.7 250 35.6
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 5.3e-24 115.5 224 35.7
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 5.3e-24 115.5 215 39.5
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.7e-23 113.2 250 35.6
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.9e-23 112.1 250 36.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.9e-23 112.1 250 35.2
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.7e-23 111.7 250 32.8
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 7.7e-23 111.7 237 34.6
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.3e-22 110.9 250 34.8
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 2.2e-22 110.2 221 34.8
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.2e-22 110.2 249 34.9
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.9e-22 109.8 237 35.0
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 6.5e-22 108.6 233 33.0
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 8.5e-22 108.2 231 34.2
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.5e-21 107.5 247 35.6
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.9e-21 107.1 231 35.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.2e-21 105.9 231 33.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.4e-21 104.8 233 34.3
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.2e-20 104.4 253 36.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.1e-20 103.6 192 38.5
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.7e-20 103.2 223 32.3
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 6.1e-20 102.1 245 33.5
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.0e-19 101.3 206 35.0
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.3e-19 100.1 199 35.2
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 6.8e-19 98.6 224 34.4
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 8.8e-19 98.2 221 32.6
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.2e-18 97.8 227 32.6
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.5e-18 97.4 224 34.4
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.5e-18 97.4 223 35.4
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 3.4e-18 96.3 231 37.7
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 5.7e-18 95.5 243 33.7
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.7e-17 92.8 226 33.6
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.7e-17 92.8 215 33.5
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 4.8e-17 92.4 216 32.4
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 4.8e-17 92.4 216 32.4
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 1.4e-16 90.9 220 35.0
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 1.4e-16 90.9 220 35.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.4e-16 90.9 237 32.9
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.4e-16 90.1 227 31.3
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 2.4e-16 90.1 247 32.8
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.0e-15 87.0 230 35.7
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.0e-15 87.0 223 33.2
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.0e-15 87.0 215 34.0
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.7e-15 86.7 211 37.4
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 5.9e-15 85.5 222 34.7
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.3e-14 83.6 190 36.8
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 3.8e-14 82.8 233 28.8
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 8.6e-14 81.6 225 31.6
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.9e-13 80.5 221 33.9
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.1e-12 77.0 177 36.2
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.5e-10 70.9 208 33.2
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 3.7e-09 66.2 212 30.7
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.1e-08 64.7 213 34.3
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 2.4e-08 63.5 196 30.1
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.6e-07 60.8 217 28.1
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.5e-07 59.7 157 36.3
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.8e-07 58.5 184 28.8
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.8e-07 58.5 184 28.8


User provided reference genes

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