Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 3.6e-201 704.9 404 100.0
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.6e-145 520.0 399 70.4
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 7.8e-140 501.1 401 68.8
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.7e-139 500.0 385 71.2
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 6.0e-124 448.4 372 66.7
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.5e-74 284.3 414 43.7
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.3e-65 254.6 406 44.8
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 4.2e-61 239.6 411 40.4
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 2.1e-60 237.3 446 38.6
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.1e-60 237.3 409 40.3
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.7e-60 236.9 412 41.5
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 2.7e-60 236.9 398 40.7
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.6e-60 236.5 411 40.1
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 6.1e-60 235.7 406 38.7
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 5.2e-59 232.6 410 39.3
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 8.8e-59 231.9 408 40.4
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 8.8e-59 231.9 412 39.6
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.6e-58 230.3 414 37.7
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.3e-57 228.0 406 40.6
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 9.1e-56 221.9 403 40.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.5e-55 219.5 408 39.5
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.7e-54 217.6 406 39.7
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.5e-53 213.8 415 38.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 4.2e-53 213.0 409 39.1
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 7.2e-53 212.2 410 39.5
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 9.5e-53 211.8 361 41.0
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.8e-52 210.3 393 39.7
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 6.1e-52 209.1 399 38.8
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.0e-50 204.1 413 38.3
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 5.7e-50 202.6 407 39.3
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 7.5e-50 202.2 411 34.8
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.3e-49 201.4 436 35.8
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 4.9e-49 199.5 409 38.1
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 4.1e-48 196.4 415 38.6
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 1.6e-47 194.5 431 36.9
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.0e-46 191.8 404 35.9
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.7e-46 191.0 415 36.1
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.1e-45 188.3 447 36.0
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.5e-45 188.0 367 38.4
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 3.3e-45 186.8 408 36.3
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 5.6e-45 186.0 397 36.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 7.3e-45 185.7 411 36.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 9.5e-45 185.3 411 35.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 9.5e-45 185.3 395 36.7
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 9.5e-45 185.3 397 36.3
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.2e-44 184.9 425 36.9
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 2.1e-44 184.1 410 34.9
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 4.7e-44 183.0 400 37.5
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.0e-43 181.8 376 35.9
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.4e-43 181.4 420 35.0
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.8e-43 181.0 403 36.0
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.3e-43 180.6 398 36.7
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 6.8e-43 179.1 395 37.7
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 6.8e-43 179.1 428 35.0
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 8.9e-43 178.7 424 34.0
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 2.6e-42 177.2 368 36.7
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 5.8e-42 176.0 409 35.0
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 7.5e-42 175.6 450 35.3
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 9.8e-42 175.3 436 33.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 4.9e-41 172.9 443 34.5
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.1e-40 171.8 430 32.8
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 1.4e-40 171.4 450 34.7
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.4e-40 171.4 428 41.4
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 1.9e-40 171.0 449 34.7
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 2.7e-39 167.2 404 35.4
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.9e-38 163.3 409 33.0
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 3.9e-38 163.3 380 36.8
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.1e-37 161.8 402 33.8
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.1e-37 161.8 412 34.5
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.9e-37 161.0 358 33.8
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.3e-37 159.8 493 30.2
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 7.3e-37 159.1 381 36.0
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 2.8e-36 157.1 405 34.3
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 4.7e-36 156.4 431 32.5
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 4.7e-36 156.4 429 34.5
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 6.2e-36 156.0 358 32.4
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.1e-35 155.2 378 33.9
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 2.3e-35 154.1 361 35.7
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 8.9e-35 152.1 405 30.4
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 8.9e-35 152.1 417 33.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 8.9e-35 152.1 252 42.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 3.4e-34 150.2 406 33.0
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 3.4e-34 150.2 411 33.1
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 4.4e-34 149.8 375 33.6
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 9.8e-34 148.7 252 40.9
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.7e-33 147.9 397 33.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 4.9e-33 146.4 256 41.0
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 6.4e-33 146.0 422 32.9
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.1e-32 145.2 418 32.1
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 2.4e-32 144.1 429 29.4
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 9.2e-32 142.1 248 42.7
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 2.3e-30 137.5 359 32.0
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 5.6e-29 132.9 483 28.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 9.5e-29 132.1 437 31.6
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.2e-28 131.7 401 31.2
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.4e-27 128.3 438 30.6
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.0e-27 126.7 454 29.5
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 3.2e-24 117.1 295 32.2
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 5.4e-24 116.3 369 30.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 7.1e-24 115.9 311 31.8
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 7.1e-24 115.9 311 31.8
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.2e-23 115.2 419 29.1
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 4.6e-23 113.2 382 28.8
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.0e-22 112.1 284 32.7
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 1.6e-20 104.8 214 37.9
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 6.2e-20 102.8 222 33.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 1.1e-19 102.1 215 35.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.6e-18 97.4 374 27.3
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.2e-17 94.4 384 27.3
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.1e-16 92.0 398 27.6
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.2e-16 90.5 157 40.1
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.0e-14 84.0 409 25.2
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 8.7e-14 82.4 287 29.3
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 2.5e-13 80.9 97 46.4
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 6.2e-12 76.3 64 59.4
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.9e-09 67.4 240 30.8


User provided reference genes

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